G271022


Basic Information

Item Value
gene id G271022
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 1951554 ~ 1951762 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307592
AATCTTTAATCAAAATCTGAAAAGTTACTTCCGGTCTGGAATGGCGTTCCATCTCTTATGACGTCAGTTTGACGGCTTGGGTTGAAAATGCATAAACCACTCCCCTGCAACCGTTAGTCTGCTATGAGCGAGAGATGGAGAGGAGGAGCGCTAAAATAAAACCCTGCCCTCTATTCAATATTCCGTTTCACTTGGAAATACATCACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307592 True 209 lncRNA 0.43 1 1951554 1951762

Neighbor

gene id symbol gene type direction distance location
CI01000066_01834401_01839641 CECR1B coding upstream 111794 1834401 ~ 1839760 (+)
CI01000066_01829752_01832316 ATP6V1E1.L, ATP6V1E1, ATP6V1E1B coding upstream 119238 1829716 ~ 1832316 (+)
CI01000066_01800741_01821480 NA coding upstream 129929 1799752 ~ 1821625 (+)
CI01000066_01793494_01798848 NA coding upstream 152136 1793199 ~ 1799418 (+)
CI01000066_01784212_01786444 GCP, OSGEP, OSGEP.L coding upstream 165048 1783627 ~ 1786506 (+)
CI01000066_01959189_01959479 NA coding downstream 6871 1958633 ~ 1960399 (+)
CI01000066_01966833_01995697 AHCYL2.S, MGC79134, AHCYL2 coding downstream 14376 1966138 ~ 1995715 (+)
CI01000066_02011151_02031083 STRIP2 coding downstream 59389 2011151 ~ 2031118 (+)
CI01000066_02055967_02056270 NA coding downstream 104205 2055967 ~ 2056333 (+)
CI01000066_02124655_02126692 YEATS4 coding downstream 172893 2124655 ~ 2126863 (+)
G270978 NA non-coding upstream 15482 1933614 ~ 1936072 (+)
G271015 NA non-coding upstream 31827 1919461 ~ 1919727 (+)
G270972 NA non-coding upstream 103541 1841686 ~ 1848013 (+)
G270923 NA non-coding upstream 160190 1789596 ~ 1791364 (+)
G270931 NA non-coding upstream 224111 1725603 ~ 1727443 (+)
G271023 NA non-coding downstream 52141 2003903 ~ 2005931 (+)
G270996 NA non-coding downstream 110927 2062689 ~ 2066286 (+)
G271050 NA non-coding downstream 156229 2107991 ~ 2108242 (+)
G271051 NA non-coding downstream 156549 2108311 ~ 2108637 (+)
G270982 NA non-coding downstream 168526 2120288 ~ 2123706 (+)
G270973 NA other upstream 103802 1844452 ~ 1847752 (+)
G270546 NA other upstream 1764877 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 1931281 19447 ~ 30531 (+)
CI01000066_02274624_02277624 NA other downstream 317407 2274557 ~ 2278119 (+)
CI01000066_02296138_02305439 CMAH other downstream 350448 2296071 ~ 2305637 (+)
G271105 NA other downstream 478948 2430710 ~ 2439169 (+)
CI01000066_03211701_03215444 NA other downstream 1261242 3211701 ~ 3215446 (+)

Expression


Co-expression Network