G271050


Basic Information

Item Value
gene id G271050
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2107991 ~ 2108242 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307620
TCAGAACATCAGTTTCTTTGCTGGGTTATCCTTCTCTCGTCTGGGCCTTTATTTATACGCTCATCTAATGTCAGACAGTCCGAGAATAAAGTTTCTTCGATGCATAGCCAAGGTCATCTCTGTGGTTCAGAATGAGGGCGTTTAATTCTGGACCATCTTCTACAGAAAACCCAAGAACATGCCTGCACTTCAGGGAAGCACCCTTGCTGGGATCACAGAGTAGACAAAAACCAGCTTACACAAAGACATCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307620 True 252 lncRNA 0.44 1 2107991 2108242

Neighbor

gene id symbol gene type direction distance location
CI01000066_02055967_02056270 NA coding upstream 51658 2055967 ~ 2056333 (+)
CI01000066_02011151_02031083 STRIP2 coding upstream 76873 2011151 ~ 2031118 (+)
CI01000066_01966833_01995697 AHCYL2.S, MGC79134, AHCYL2 coding upstream 112276 1966138 ~ 1995715 (+)
CI01000066_01959189_01959479 NA coding upstream 147592 1958633 ~ 1960399 (+)
CI01000066_01950657_01957668 TMEM209 coding upstream 149621 1950657 ~ 1958370 (+)
CI01000066_02124655_02126692 YEATS4 coding downstream 16413 2124655 ~ 2126863 (+)
CI01000066_02144721_02147772 FRS2A, FRS2 coding downstream 36479 2144721 ~ 2149180 (+)
CI01000066_02274624_02277624 NA coding downstream 166315 2274557 ~ 2278119 (+)
CI01000066_02287451_02287819 NA coding downstream 179102 2287344 ~ 2288534 (+)
CI01000066_02296138_02305439 CMAH coding downstream 187829 2296071 ~ 2305637 (+)
G270996 NA non-coding upstream 41705 2062689 ~ 2066286 (+)
G271023 NA non-coding upstream 102060 2003903 ~ 2005931 (+)
G271022 NA non-coding upstream 156229 1951554 ~ 1951762 (+)
G270978 NA non-coding upstream 171919 1933614 ~ 1936072 (+)
G271015 NA non-coding upstream 188264 1919461 ~ 1919727 (+)
G271051 NA non-coding downstream 69 2108311 ~ 2108637 (+)
G270982 NA non-coding downstream 12046 2120288 ~ 2123706 (+)
G270985 NA non-coding downstream 42054 2150296 ~ 2160456 (+)
G271054 NA non-coding downstream 54333 2162575 ~ 2162800 (+)
G271058 NA non-coding downstream 62721 2170963 ~ 2171281 (+)
G270973 NA other upstream 260239 1844452 ~ 1847752 (+)
G270546 NA other upstream 1921314 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 2087718 19447 ~ 30531 (+)
G271105 NA other downstream 322468 2430710 ~ 2439169 (+)
CI01000066_03211701_03215444 NA other downstream 1104762 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 1238551 3353662 ~ 3429516 (+)

Expression


Co-expression Network