G271058


Basic Information

Item Value
gene id G271058
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2170963 ~ 2171281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307628
CTCCTTCAGTGTCGACTCCGGTTTGAACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACCGAAGCACGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGACTGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAACAGTGTGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGCTATAATAAATGATCTGTGGGGTATTTTGAGCTGAAACTTCACAGACACATTCTGGGGACACCAGAGACTTATATTACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307628 True 319 lncRNA 0.45 1 2170963 2171281

Neighbor

gene id symbol gene type direction distance location
CI01000066_02144721_02147772 FRS2A, FRS2 coding upstream 21783 2144721 ~ 2149180 (+)
CI01000066_02124655_02126692 YEATS4 coding upstream 44100 2124655 ~ 2126863 (+)
CI01000066_02055967_02056270 NA coding upstream 114630 2055967 ~ 2056333 (+)
CI01000066_02011151_02031083 STRIP2 coding upstream 139845 2011151 ~ 2031118 (+)
CI01000066_01966833_01995697 AHCYL2.S, MGC79134, AHCYL2 coding upstream 175248 1966138 ~ 1995715 (+)
CI01000066_02274624_02277624 NA coding downstream 103276 2274557 ~ 2278119 (+)
CI01000066_02287451_02287819 NA coding downstream 116063 2287344 ~ 2288534 (+)
CI01000066_02296138_02305439 CMAH coding downstream 124790 2296071 ~ 2305637 (+)
CI01000066_02320093_02321778 NA coding downstream 148812 2320093 ~ 2322043 (+)
CI01000066_02330898_02340303 NA coding downstream 159617 2330898 ~ 2341338 (+)
G271054 NA non-coding upstream 8163 2162575 ~ 2162800 (+)
G270985 NA non-coding upstream 10507 2150296 ~ 2160456 (+)
G270982 NA non-coding upstream 47257 2120288 ~ 2123706 (+)
G271051 NA non-coding upstream 62326 2108311 ~ 2108637 (+)
G271050 NA non-coding upstream 62721 2107991 ~ 2108242 (+)
G271063 NA non-coding downstream 6730 2178011 ~ 2178216 (+)
G271068 NA non-coding downstream 14105 2185386 ~ 2185629 (+)
G271085 NA non-coding downstream 81361 2252642 ~ 2252850 (+)
G271074 NA non-coding downstream 85498 2256779 ~ 2257258 (+)
G271111 NA non-coding downstream 114032 2285313 ~ 2286834 (+)
G270973 NA other upstream 323211 1844452 ~ 1847752 (+)
G270546 NA other upstream 1984286 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 2150690 19447 ~ 30531 (+)
G271105 NA other downstream 259429 2430710 ~ 2439169 (+)
CI01000066_03211701_03215444 NA other downstream 1041723 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 1175512 3353662 ~ 3429516 (+)

Expression


Co-expression Network