G271124


Basic Information

Item Value
gene id G271124
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2302834 ~ 2313213 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307701
GAAAATTCAGCTTTGATCACAGGAAGGCAATTTGTTAGAAAAGATTTCTATTTTGAATAAATGCTGTTATTTTTAACATTTTTAAATCAAAGAATCCTGAAAAAAAGGATCACAGCATGTTATAAAAAATATTAAGCAGCACAACTGTTTCCACTTTCCCTTTTCGAAAATTAAACAGCATATTAGAATGATTGCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCACAGGAATAAACTACATTTTAAAGTATATTCAAATAGAAAACCATTATTTTAAATTGTAATAATATTTTTTAAAATATATATTGCTGTTTTTGACTAGATAAATGCAGGCTTGATGAGCATAAGGCTTATTTCATAATGCCACATAAGCTAATAATTATCAAAAATGGTAATATAATAAAGTCCTTTCTTGTCACCATTTCGCCAGCCTACACTTTACATAATAGGCCTGTAGGTGGCACTTGGGCTTCATTAACTATGATAGTTCCATCAAATAGTAAACGGTGTATCAGCACTAAATGAATTGAACACTACTTTTGGCTTTGTAGTCCGTTAACATCCATTTTGTCAGCGATGCATTTTGATTTATAAAATGAGACAAACAGCAGAAATCGCTCGTCTGTCCATGTAATTTCCACTTCACGTTGTTCAATGAAATTTGAACTTGTTGTGCCAGATCACGATTGGTTGGGGTGTTATACATGACAAACCGGCATTGGTGAATTATGTAATATTTTAAAATATATAATATATAGATTTTTAATTAAATCGACACACTAGCTTTGATTATTGATGGGGAAAACCCATAGCAACAAAGTCACATACACCTAGGATGGCTTGAGGGTGAGTAAAGCTTGGGGTAATTTTCATTTCAAAGTGAACTAATCCTTTAATCATTTGATACAATGCACTTACTGTGTACATACATATATACTTATATTTTTAAAGATACCTGCTTGCAATTGTGTTTTGCGTTACACCAACACAATATTATTTTATATTATATATTAAATATATATTATTTGATGCAAATTTAGTAGGTAAAGTCACCTAATATAAAGTGTGACCAAAAATTATTAGTATGCTAGTGTTTCTAATTACAAGGATATCAGCATGTCCTCCTAATGGGAGCATGGCCTGAAACCTGAATACACTCTACTATATAAGGCCCCAGTTTCACAGACAGGGCTTAGGCCTTAAGTCAGGATTAGGCCTTAGGTCAATTAGGGTATTTAAGTGGCTTTTATAAAAAGCCACTTAAATGCCTCAGATGACTAAAACTTTGGAAGAGACGGCGCCAACTCCTGCGATGACTTCAGAAGATGCAACATCTGGATCAACACGCACATTCACATTCTATAAATCCTAATTATTGTTAATATGTAATTCATTTTTCCAGGAGCTCTTTGCTTCTACCTCCAATTACATTGCTAACAGTGATTGTATGTTAATCGCCTAAATTATTACATTATTAGCTAACTGCAGTCTCCAAATTGTAATGTTGACATGCATTCTCTGTAAAGCTGCTTTGAAACGATATGTATCGTGAAAAGCGCTATACAAATAAATGTGAATTGAATTGAATTGAAATAAAAGTACCCTAGAAAAAAACATTATTGGTGTGCATCTTAAGCAAAACAATAACACTGGCATATTTTAAGGTATGTCAGTGCAAGTTACTTTCCATTGAAACAGCTCAAACATGCATTTTAGTCTAGGACTAGCTTAAGCCTTGTTTGCGAAACTGGTGGAAGGACTTTATTGTAGATCAATCAGTGAGTGCACACACACACCCACACACACATTATGGTTATCATTGTCATTTTTCTGGGATACACCCTTATTTATGTGGTTTCGGGGGTCTGAGGGTGTGATACTGATGCTGCTCAATCATACATCTTAAAAATAATAAAAAAAATAATAAAAATGTATTGTGTTTCTCCGAAATACTTGATTCTGTGCTCAAATAATTGTACATAATGATGCTAAACAGTACAATTGTTTGTTTTCCCTGGCATCTGATTTTCTTCATATTTTTTCCACAGTAGTTTTATGTCTCTTTACATCAGGTTAAGTTTGCTGTATTATTGTCATGTAGTTTGGTCTTATTTGGGTGGAAGACAGCAATGTGTCAAGGTCAATGGGGTAAAGTCACCTCTGCAGACAAACAACATGGGAGTACCGCAAGGTTCTGTACTTGGCCCTCTGTTGTTTACAATGTACAATGTGCAAAACGAAAATGTGTCGCACCATGTACGTTTCGTGACAGTTTCAGTGTGAAATGTCCACTGAGTGGCGCTAAAAGCATGTTAAGTTTTTTTCCGAAACAGATGAACGTGAATGTTTTTATTACGTTGTTTTTATACGTATCACCGCAATTCTGATTTGAAATGTCCGGTGAGTGGCGCTAATGCTCCATTACATTTAAAAATAACGTGCCACCAACACTACACCTAAACTTACCCGATAGTGGTAACAAAAACAAATGTGACATAAAAAGCATTTGTAATCATGCCATTTTAGCTTGTTTTTGATCTCTCATCTTTGAGTTCTTTTACCATGACACATCTTTCAGGGGATTCGTACCCAAGGCTTTCACATCCTAAGTACAACTCTGTATCAGCTGAGTTACCGAGCAAACTTATGTCAGAAAAGCGAAACATATGGAGCTGGTTAAGCAATGCAAAGTCCAAAATGTATTTGTTTACAAATCGTGCACTTTGGTAAAAGCGTTTTGAGATCATAACATAATATTGTGCAAGGAGATGTGAATCATAACGATTAAAAGTGCTTGCTGTTTTACTGCCTCTAGTGTACATTTATGTTGGAAACTGCACCTATATGTACGTATTGGTACGTATTTTGTGACTTGCAAGAATGTTCCCACAAATATGTCTTTCCATGAGACCAGGTTGGTCATATTAAGTACATCTGTAAGAAGGTCAAACCAATCCTAAATTGTTTTCGTGATATTAGAAGGGACTAAAACAGGCAATAAAAGTTATGGACCAGAAACCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307701 True 3051 lncRNA 0.35 2 2302834 2313213

Neighbor

gene id symbol gene type direction distance location
CI01000066_02287451_02287819 NA coding upstream 14300 2287344 ~ 2288534 (+)
CI01000066_02274624_02277624 NA coding upstream 24715 2274557 ~ 2278119 (+)
CI01000066_02144721_02147772 FRS2A, FRS2 coding upstream 153654 2144721 ~ 2149180 (+)
CI01000066_02124655_02126692 YEATS4 coding upstream 175971 2124655 ~ 2126863 (+)
CI01000066_02055967_02056270 NA coding upstream 246501 2055967 ~ 2056333 (+)
CI01000066_02320093_02321778 NA coding downstream 6880 2320093 ~ 2322043 (+)
CI01000066_02330898_02340303 NA coding downstream 17685 2330898 ~ 2341338 (+)
CI01000066_02456114_02457813 NA coding downstream 142083 2455296 ~ 2458517 (+)
CI01000066_02503549_02509560 NA coding downstream 188875 2502088 ~ 2510262 (+)
CI01000066_02511030_02521229 ZDHHC17 coding downstream 197741 2510954 ~ 2521490 (+)
G271111 NA non-coding upstream 16000 2285313 ~ 2286834 (+)
G271074 NA non-coding upstream 45576 2256779 ~ 2257258 (+)
G271085 NA non-coding upstream 49984 2252642 ~ 2252850 (+)
G271068 NA non-coding upstream 117205 2185386 ~ 2185629 (+)
G271063 NA non-coding upstream 124618 2178011 ~ 2178216 (+)
G271129 NA non-coding downstream 1790 2315003 ~ 2315625 (+)
G271104 NA non-coding downstream 4724 2317937 ~ 2318240 (+)
G271143 NA non-coding downstream 20964 2334177 ~ 2334388 (+)
G271086 NA non-coding downstream 21383 2334596 ~ 2393844 (+)
G271206 NA non-coding downstream 227497 2540710 ~ 2540943 (+)
G270973 NA other upstream 455082 1844452 ~ 1847752 (+)
G270546 NA other upstream 2116157 184528 ~ 186677 (+)
CI01000066_00019553_00029834 PAHX, PHYH other upstream 2282561 19447 ~ 30531 (+)
G271105 NA other downstream 117497 2430710 ~ 2439169 (+)
CI01000066_03211701_03215444 NA other downstream 899791 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 1033580 3353662 ~ 3429516 (+)

Expression


Co-expression Network