G271206


Basic Information

Item Value
gene id G271206
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2540710 ~ 2540943 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307790
CAGCCTTATTGAGATGTGATGATGAACCCACTAGATGCAAAACTATTTGCAGAAATGGGCAATTGCTCAATGCAGAGAAGATCTTGGTTATGTCAAAACCGTAACCAAGCCGTCCACACACACAGAACGCATTTTCTGCACCGCTTTTCCATTGGTTTCTATGTAAACATGCACTAGACGGACATCTTTGATCATTGCACATGTTTATTGCACTTTAAAATAAACATGTCTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307790 True 234 lncRNA 0.40 1 2540710 2540943

Neighbor

gene id symbol gene type direction distance location
CI01000066_02511030_02521229 ZDHHC17 coding upstream 19220 2510954 ~ 2521490 (+)
CI01000066_02503549_02509560 NA coding upstream 30448 2502088 ~ 2510262 (+)
CI01000066_02456114_02457813 NA coding upstream 82193 2455296 ~ 2458517 (+)
CI01000066_02330898_02340303 NA coding upstream 199372 2330898 ~ 2341338 (+)
CI01000066_02320093_02321778 NA coding upstream 218667 2320093 ~ 2322043 (+)
CI01000066_02603700_02610129 GPR22, GPR22A coding downstream 61830 2602773 ~ 2610667 (+)
CI01000066_02623527_02632720 DUS4L coding downstream 82584 2623527 ~ 2632755 (+)
CI01000066_02636488_02638384 NA coding downstream 95436 2636279 ~ 2638578 (+)
CI01000066_02644148_02648505 BCAP29 coding downstream 103143 2644086 ~ 2649105 (+)
CI01000066_02698232_02698587 NA coding downstream 157289 2698232 ~ 2698870 (+)
G271086 NA non-coding upstream 146866 2334596 ~ 2393844 (+)
G271143 NA non-coding upstream 206322 2334177 ~ 2334388 (+)
G271104 NA non-coding upstream 222470 2317937 ~ 2318240 (+)
G271129 NA non-coding upstream 225085 2315003 ~ 2315625 (+)
G271124 NA non-coding upstream 227497 2302834 ~ 2313213 (+)
G271207 NA non-coding downstream 190 2541133 ~ 2541389 (+)
G271098 NA non-coding downstream 52957 2593900 ~ 2650057 (+)
G271249 NA non-coding downstream 124273 2665216 ~ 2680156 (+)
G271267 NA non-coding downstream 149290 2690233 ~ 2690548 (+)
G271105 NA other upstream 101541 2430710 ~ 2439169 (+)
CI01000066_02296138_02305439 CMAH other upstream 233690 2296071 ~ 2305637 (+)
CI01000066_02274624_02277624 NA other upstream 261150 2274557 ~ 2278119 (+)
G270973 NA other upstream 692958 1844452 ~ 1847752 (+)
CI01000066_03211701_03215444 NA other downstream 672061 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 805850 3353662 ~ 3429516 (+)

Expression


Co-expression Network