G271346


Basic Information

Item Value
gene id G271346
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2864731 ~ 2865045 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307940
CAAAACAAGCATCATATAATTTTTATAATTAATATACAGTTGGGGCCAAAAGTCTGAGGCCACAAAGAAAATGACTATATCGTAAACCAATAAATAAAGTAAAGATTTTGAACATTTTAAAATAAAGAAACATTATGATTTAAAATTACTAAGAGCTATTTAAGATTCAGCACTATTGATAGGTCAGTTATCAAACGTAAATTAATTTTCCATTAAAGCACATAACATAAACATATATAACATAACATGTATAACATACATATATATCAAACAACATAAACAAACATAACATAAAACCCATTGTATAACATAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307940 True 315 lncRNA 0.24 1 2864731 2865045

Neighbor

gene id symbol gene type direction distance location
CI01000066_02808136_02808643 NA coding upstream 56051 2806997 ~ 2808680 (+)
CI01000066_02698232_02698587 NA coding upstream 165861 2698232 ~ 2698870 (+)
CI01000066_02644148_02648505 BCAP29 coding upstream 215626 2644086 ~ 2649105 (+)
CI01000066_02636488_02638384 NA coding upstream 226265 2636279 ~ 2638578 (+)
CI01000066_02623527_02632720 DUS4L coding upstream 231976 2623527 ~ 2632755 (+)
CI01000066_02977587_02982602 NA coding downstream 110602 2975647 ~ 2982870 (+)
CI01000066_03011532_03035612 NA coding downstream 146370 3011415 ~ 3037266 (+)
CI01000066_03148145_03156040 NA coding downstream 283100 3148145 ~ 3156468 (+)
CI01000066_03174704_03185343 NAMPT, NAMPT.S, NAMPTA coding downstream 309659 3174704 ~ 3185343 (+)
CI01000066_03195286_03201328 SYPL1 coding downstream 330241 3195286 ~ 3201672 (+)
G271336 NA non-coding upstream 16564 2847075 ~ 2848167 (+)
G271267 NA non-coding upstream 174183 2690233 ~ 2690548 (+)
G271249 NA non-coding upstream 184575 2665216 ~ 2680156 (+)
G271098 NA non-coding upstream 214674 2593900 ~ 2650057 (+)
CI01000066_02832702_02867162 NA non-coding downstream 1109 2831625 ~ 2867388 (+)
G271356 NA non-coding downstream 63019 2928064 ~ 2929367 (+)
G271365 NA non-coding downstream 80306 2945351 ~ 2945828 (+)
G271370 NA non-coding downstream 93229 2958274 ~ 2958568 (+)
G271376 NA non-coding downstream 101315 2966360 ~ 2966650 (+)
G271105 NA other upstream 425562 2430710 ~ 2439169 (+)
CI01000066_02296138_02305439 CMAH other upstream 557711 2296071 ~ 2305637 (+)
CI01000066_02274624_02277624 NA other upstream 585171 2274557 ~ 2278119 (+)
G270973 NA other upstream 1016979 1844452 ~ 1847752 (+)
CI01000066_03211701_03215444 NA other downstream 347959 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 481748 3353662 ~ 3429516 (+)

Expression


Co-expression Network