G271370


Basic Information

Item Value
gene id G271370
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2958274 ~ 2958568 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307971
CAATAATTGACGTGACCCAGTTGCTAAATTTAGTTTCACATTCTCTGGAAGGTTCTTCCGGAAATAAACAATGTTTTCAATGTGCAGTGTTCCTGTGGGCATTCAAAAGCTCAGGGAGAAAATGGACAATGAAGCATTTGCTCCCAGCGGAGCGTCTGCCATTCACACGCGTCTCTGCGGCCCCGCAGACGACCTTTCTGAAAGGCCATCATGCCCTCGTGCCCTCCCGTTACCCTCATTCACACCAGCCACTGCACAGCTTTCTACAAGAACCTCTCCTCTCCTTGAGTTTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307971 True 295 lncRNA 0.49 1 2958274 2958568

Neighbor

gene id symbol gene type direction distance location
CI01000066_02832702_02867162 NA coding upstream 90886 2831625 ~ 2867388 (+)
CI01000066_02808136_02808643 NA coding upstream 149594 2806997 ~ 2808680 (+)
CI01000066_02698232_02698587 NA coding upstream 259404 2698232 ~ 2698870 (+)
CI01000066_02644148_02648505 BCAP29 coding upstream 309169 2644086 ~ 2649105 (+)
CI01000066_02636488_02638384 NA coding upstream 319808 2636279 ~ 2638578 (+)
CI01000066_02977587_02982602 NA coding downstream 17079 2975647 ~ 2982870 (+)
CI01000066_03011532_03035612 NA coding downstream 52847 3011415 ~ 3037266 (+)
CI01000066_03148145_03156040 NA coding downstream 189577 3148145 ~ 3156468 (+)
CI01000066_03174704_03185343 NAMPT, NAMPT.S, NAMPTA coding downstream 216136 3174704 ~ 3185343 (+)
CI01000066_03195286_03201328 SYPL1 coding downstream 236718 3195286 ~ 3201672 (+)
G271365 NA non-coding upstream 12446 2945351 ~ 2945828 (+)
G271356 NA non-coding upstream 28907 2928064 ~ 2929367 (+)
G271346 NA non-coding upstream 93229 2864731 ~ 2865045 (+)
G271336 NA non-coding upstream 110107 2847075 ~ 2848167 (+)
G271376 NA non-coding downstream 7792 2966360 ~ 2966650 (+)
G271378 NA non-coding downstream 11504 2970072 ~ 2970283 (+)
G271383 NA non-coding downstream 24620 2983188 ~ 2985253 (+)
G271384 NA non-coding downstream 26768 2985336 ~ 2985830 (+)
G271105 NA other upstream 519105 2430710 ~ 2439169 (+)
CI01000066_02296138_02305439 CMAH other upstream 651254 2296071 ~ 2305637 (+)
CI01000066_02274624_02277624 NA other upstream 678714 2274557 ~ 2278119 (+)
G270973 NA other upstream 1110522 1844452 ~ 1847752 (+)
CI01000066_03211701_03215444 NA other downstream 254436 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 388225 3353662 ~ 3429516 (+)

Expression


Co-expression Network