G271378


Basic Information

Item Value
gene id G271378
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2970072 ~ 2970283 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307979
GTTTTACTGGAGCAGGATTCTCAGAATATCTGCCTGCTAATGTGCATGCTAAACGTATGATTCAACGCAAGTCCGTGATACAGATTGTGTCAGTGTCGACCGCTGGGAACGGCTTCTTTGCGCAAGCAGATTCCCAGATTACATAAGGGGACTCCTGGAGACTACAGACATCCGGAGGCTCAGGCTGATAAGAATATAACCTGGCATCTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307979 True 212 lncRNA 0.48 1 2970072 2970283

Neighbor

gene id symbol gene type direction distance location
CI01000066_02832702_02867162 NA coding upstream 102684 2831625 ~ 2867388 (+)
CI01000066_02808136_02808643 NA coding upstream 161392 2806997 ~ 2808680 (+)
CI01000066_02698232_02698587 NA coding upstream 271202 2698232 ~ 2698870 (+)
CI01000066_02644148_02648505 BCAP29 coding upstream 320967 2644086 ~ 2649105 (+)
CI01000066_02636488_02638384 NA coding upstream 331606 2636279 ~ 2638578 (+)
CI01000066_02977587_02982602 NA coding downstream 5364 2975647 ~ 2982870 (+)
CI01000066_03011532_03035612 NA coding downstream 41132 3011415 ~ 3037266 (+)
CI01000066_03148145_03156040 NA coding downstream 177862 3148145 ~ 3156468 (+)
CI01000066_03174704_03185343 NAMPT, NAMPT.S, NAMPTA coding downstream 204421 3174704 ~ 3185343 (+)
CI01000066_03195286_03201328 SYPL1 coding downstream 225003 3195286 ~ 3201672 (+)
G271376 NA non-coding upstream 3422 2966360 ~ 2966650 (+)
G271370 NA non-coding upstream 11504 2958274 ~ 2958568 (+)
G271365 NA non-coding upstream 24244 2945351 ~ 2945828 (+)
G271356 NA non-coding upstream 40705 2928064 ~ 2929367 (+)
G271383 NA non-coding downstream 12905 2983188 ~ 2985253 (+)
G271384 NA non-coding downstream 15053 2985336 ~ 2985830 (+)
G271385 NA non-coding downstream 18848 2989131 ~ 2989407 (+)
G271387 NA non-coding downstream 20088 2990371 ~ 2990825 (+)
G271105 NA other upstream 530903 2430710 ~ 2439169 (+)
CI01000066_02296138_02305439 CMAH other upstream 663052 2296071 ~ 2305637 (+)
CI01000066_02274624_02277624 NA other upstream 690512 2274557 ~ 2278119 (+)
G270973 NA other upstream 1122320 1844452 ~ 1847752 (+)
CI01000066_03211701_03215444 NA other downstream 242721 3211701 ~ 3215446 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 376510 3353662 ~ 3429516 (+)

Expression


Co-expression Network