G271396


Basic Information

Item Value
gene id G271396
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3045334 ~ 3045971 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU307998
AAACGGATCGCGCGGGAAAAAACGACCATGCGACCCTTCAGAAATGTGAATGACCAAATGCAAGTTGTCAAATACTGCGCGTTCAGGTGTGTTGCATGCATGCAACGCAACGCAAACGCACTGACATTGTGTGCGTCGCGTTCTGCCACAGCTGCGGTTCTGCAGCTGCATTGATTGCATTTCTCCGCGCAGTTCTCATACACTGATTTTTCCCAGTGATAAAAGCCGTTAAAGCCTCTTACCTGGAGTTTTTCTGTGCCCTGTAATGACGGCTTCTCCCGTGACTGGATGCAGCCAGGTTGTGCTCTTCGCTTCTTCATTGATAAAGAACACGCGTCCGTCCCGGGTCACGCCGTAACTCCATGAGGAAGGCAGGCAAGACAGCCACTCCGGGTTCAGGTCCGCCGCCATGTCTGAGCACTGAGAGCAGCGCTCGAGCTGCGCGCCTCCGACCCGTTCGCGCGTACTCGGGATTCCTTAGCAACGGTGTCCAGGGCGCAGGCGGGAGAAGCAAAAGAGCCTCTGGGGGGCGGGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU307998 True 537 lncRNA 0.56 2 3045334 3045971

Neighbor

gene id symbol gene type direction distance location
CI01000066_03011532_03035612 NA coding upstream 8068 3011415 ~ 3037266 (+)
CI01000066_02977587_02982602 NA coding upstream 62464 2975647 ~ 2982870 (+)
CI01000066_02832702_02867162 NA coding upstream 177946 2831625 ~ 2867388 (+)
CI01000066_02808136_02808643 NA coding upstream 236654 2806997 ~ 2808680 (+)
CI01000066_02698232_02698587 NA coding upstream 346464 2698232 ~ 2698870 (+)
CI01000066_03148145_03156040 NA coding downstream 102174 3148145 ~ 3156468 (+)
CI01000066_03174704_03185343 NAMPT, NAMPT.S, NAMPTA coding downstream 128733 3174704 ~ 3185343 (+)
CI01000066_03195286_03201328 SYPL1 coding downstream 149315 3195286 ~ 3201672 (+)
CI01000066_03211701_03215444 NA coding downstream 165730 3211701 ~ 3215446 (+)
CI01000066_03231699_03235207 NA coding downstream 185728 3231699 ~ 3237053 (+)
G271395 NA non-coding upstream 348 2999812 ~ 3044986 (+)
G271393 NA non-coding upstream 46582 2998494 ~ 2998752 (+)
G271392 NA non-coding upstream 47496 2997584 ~ 2997838 (+)
G271390 NA non-coding upstream 51426 2993560 ~ 2993908 (+)
G271389 NA non-coding upstream 51862 2993239 ~ 2993472 (+)
G271458 NA non-coding downstream 67784 3113755 ~ 3113998 (+)
G271461 NA non-coding downstream 74695 3120666 ~ 3120901 (+)
G271485 NA non-coding downstream 157425 3203396 ~ 3204172 (+)
G271435 NA non-coding downstream 210681 3256652 ~ 3264434 (+)
CI01000066_03303268_03342257 GRM7 non-coding downstream 245187 3298872 ~ 3342605 (+)
G271105 NA other upstream 606165 2430710 ~ 2439169 (+)
CI01000066_02296138_02305439 CMAH other upstream 738314 2296071 ~ 2305637 (+)
CI01000066_02274624_02277624 NA other upstream 765774 2274557 ~ 2278119 (+)
G270973 NA other upstream 1197582 1844452 ~ 1847752 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B other downstream 300822 3353662 ~ 3429516 (+)

Expression


Co-expression Network