Gene
RNA
| Item | Value |
|---|---|
| gene id | G272412 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000066 |
| NCBI id | null |
| chromosome length | 3719324 |
| location | 3077560 ~ 3077956 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: sporozoite surface protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU309163 | True | 222 | lncRNA | 0.35 | 2 | 3077560 | 3077956 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000066_03044933_03045997 | NA | coding | downstream | 31563 | 3044336 ~ 3045997 (-) |
| CI01000066_02891474_02931062 | PLEKHA5 | coding | downstream | 146498 | 2890829 ~ 2931062 (-) |
| CI01000066_02874325_02887004 | AEBP2 | coding | downstream | 190227 | 2874061 ~ 2887333 (-) |
| CI01000066_02709190_02806338 | PDE3A | coding | downstream | 271222 | 2709190 ~ 2806338 (-) |
| CI01000066_02652332_02680009 | SLCO1C1 | coding | downstream | 397520 | 2651327 ~ 2680040 (-) |
| CI01000066_03158972_03165320 | PIK3CG | coding | upstream | 80360 | 3158316 ~ 3165320 (-) |
| CI01000066_03203296_03203476 | NA | coding | upstream | 125167 | 3203123 ~ 3203476 (-) |
| CI01000066_03439936_03446824 | NA | coding | upstream | 361723 | 3439679 ~ 3448858 (-) |
| CI01000066_03454386_03455995 | NA | coding | upstream | 376374 | 3454330 ~ 3456166 (-) |
| CI01000066_03649007_03654018 | LMOD2 | coding | upstream | 570976 | 3648932 ~ 3654018 (-) |
| G272083 | NA | non-coding | downstream | 94679 | 2981752 ~ 2982881 (-) |
| G272061 | NA | non-coding | downstream | 96208 | 2979464 ~ 2981352 (-) |
| G272078 | NA | non-coding | downstream | 142014 | 2934585 ~ 2935546 (-) |
| G272075 | NA | non-coding | downstream | 219262 | 2775961 ~ 2858298 (-) |
| G272417 | NA | non-coding | upstream | 7259 | 3085215 ~ 3085603 (-) |
| G272428 | NA | non-coding | upstream | 35799 | 3113755 ~ 3113997 (-) |
| G272431 | NA | non-coding | upstream | 42508 | 3120464 ~ 3120906 (-) |
| G272462 | NA | non-coding | upstream | 136840 | 3214796 ~ 3216074 (-) |
| G272472 | NA | non-coding | upstream | 165312 | 3243268 ~ 3314289 (-) |
| G272221 | NA | other | downstream | 1092332 | 1959102 ~ 1985228 (-) |
| CI01000066_01843043_01848783 | NA | other | downstream | 1228701 | 1842554 ~ 1849466 (-) |
| CI01000066_01823227_01826380 | NA | other | downstream | 1252857 | 1823029 ~ 1826817 (-) |
