G271485


Basic Information

Item Value
gene id G271485
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3203396 ~ 3204172 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU308092
TGTTTCTCTCGCTCGCTCGTCTCGCTGTCTGTGAAGGAAGAAGGAAGAGCAATGGCGACGCTGTACCGCCGCGCGCTCACACTGCACACAGGAGCCACAACACACACTATCTTTACTCTGATACTGCTGGGAAGAAGCTCTTGAAGGGTGCAGAGGTGATCAATCTCAGTAAAGCAGGTGAGTGAGTGAGTGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGCGTTTCTTCTCGTGTCATCATGTTATTGTTGTGTTATTGCTGTTTGCACCAACAATAGCCTAACTTTTCAATAATGTCACAGTAACAAAACTTAAAAATATTGACGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU308092 True 336 lncRNA 0.47 2 3203396 3204172

Neighbor

gene id symbol gene type direction distance location
CI01000066_03195286_03201328 SYPL1 coding upstream 1724 3195286 ~ 3201672 (+)
CI01000066_03174704_03185343 NAMPT, NAMPT.S, NAMPTA coding upstream 18053 3174704 ~ 3185343 (+)
CI01000066_03148145_03156040 NA coding upstream 46928 3148145 ~ 3156468 (+)
CI01000066_03011532_03035612 NA coding upstream 166130 3011415 ~ 3037266 (+)
CI01000066_02977587_02982602 NA coding upstream 220526 2975647 ~ 2982870 (+)
CI01000066_03211701_03215444 NA coding downstream 7529 3211701 ~ 3215446 (+)
CI01000066_03231699_03235207 NA coding downstream 27527 3231699 ~ 3237053 (+)
CI01000066_03241522_03246506 GRM8 coding downstream 37350 3241522 ~ 3246802 (+)
CI01000066_03303268_03342257 GRM7 coding downstream 98781 3298872 ~ 3342605 (+)
CI01000066_03354136_03429399 GRM8A, GRM6, GRM8, GRM8B coding downstream 149928 3353662 ~ 3429516 (+)
G271461 NA non-coding upstream 82495 3120666 ~ 3120901 (+)
G271458 NA non-coding upstream 89398 3113755 ~ 3113998 (+)
G271396 NA non-coding upstream 157425 3045334 ~ 3045971 (+)
G271395 NA non-coding upstream 158410 2999812 ~ 3044986 (+)
G271393 NA non-coding upstream 204644 2998494 ~ 2998752 (+)
G271435 NA non-coding downstream 52480 3256652 ~ 3264434 (+)
CI01000066_03460752_03462377 NA non-coding downstream 256288 3460460 ~ 3462937 (+)
G271479 NA non-coding downstream 377236 3581408 ~ 3586319 (+)
G271478 NA non-coding downstream 410789 3614961 ~ 3617633 (+)
G271105 NA other upstream 764227 2430710 ~ 2439169 (+)
CI01000066_02296138_02305439 CMAH other upstream 896376 2296071 ~ 2305637 (+)
CI01000066_02274624_02277624 NA other upstream 923836 2274557 ~ 2278119 (+)
G270973 NA other upstream 1355644 1844452 ~ 1847752 (+)

Expression


Co-expression Network