CI01000068_00174820_00180047



Basic Information


Item Value
gene id CI01000068_00174820_00180047
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 173549 ~ 180047 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000068_00174820_00180047.mRNA
GAGACTATCAAGGAACAAATAGACAAAATGCAGGTGACCATCGATGACCACATGAAAGCCAAAAAGAGCTGTGTGGAAGAGGTTGAGCTCATTAAGAATTACACTGATGCATTAAAAAAACTCAAACACTCATCAGTACCAAAGATGACCCCTGTAAGAGAGGAATATCAACACCATCCCATTCAGACAATGATCTTCACCACCTGGGCCAGAATGCAGAACATTGTGGGACAGCCTCCAGTGACTCTTGACCCAGACACAGCCTCAGATAAACTGATGGTGTCACAGGATTGCACCAGTGTTCAGTACGTGGAAAAGAGACTGAAAGTGTCTGACAACCCAAAGAGGCTGTATGTGGGAGTGCTGGCCTCACAGGGCTTCAGCTCGGGTCTGCACTGCTGGGACGTAGAGGTGGGAGACAACAAAAACTGGACGCTGGGAGTTGTGGGGGAAACAGTGAACCGCAAATATCTTTACAAAATGGATCCAATGAGTCGTTTTTGGTGTTTTCGTTACGTGGATAGAAAATACAAGAAAGGTAACAAACCTGCCAAAGATATTGATAACAATGAGAGGCCAAATATCATCCGACTGCAGCTGGACTTTCACAAAGGAGTCCTGAGATTCATTGAACCCTTCAGAAACAGAATTTTGTGCACCTTCACCGGTGGATTTCCAGAGAGGGTGTTCCCTTATTTCTGCACTGGAGATTTGAGAAAGCCACTTAATGTTTTTCCAGCAAATAAACAACAACTGTAAACCACAACTAACAAGACATTTTTTTACACGTTGTGTTTTGTGCATGTGCCATGTTCCTTTAAAACAAAGGACATTAGGTTTGATAATCTATCAAATGCCATGCATCATGCATTTCTAAGTGTGAAGTAGGGCTGCACGATATATCATTTTAGCATCGATATCGCAATGTGTGCATCCGCAATAGTGACATCACAGGATGTGCGCCGTCTAGTCTAGTATAGGAATTGTTAATCCGTACGCACCAGATGCACCACAGTTCAAAATGCATCCGCAATAGTGACATCGCAGGATGTGCGCTTTCTAGTCTAGTATAGGAATTGTTAATCCGTACGCACCAGATGCACCACAGTTCAAAATGCATGTGATTCTCGGATTAATTGCAAAGTTTGACCATCATACAATGAACATTTATCATTTGCACGTGTTTTTGGTCCTGTCAGTTTAAACATTCAAGTGATTTTAAACCATTTGAGCGCAAGATGGCGCGAAAGAGAGCTCAATTCTGAATGTGCAGCTGTTTTCTGTGCGCACAGAGCCACGCAGATGCACATGAACACCGAATTCCTTTCCCTTCAACATGTGCCCGAACGGACACATACACGCAAAAAAAATGTCAAAATGCACATGGATGTGTAACAGTATTTTGGATCCGCAAAAGTGGACAGCAGCCTAATATTCCTGCTGCTTTCTGTGTTGTGAATGTTATTCAAACAACAAAAGACAAAGAGAAAAATCACTTTTGTAGCTTTAACACAGATTAGTTATATTTAATTGACTATGCAGTGTTATTTTTCATTTGATAATTCAATTTCTGTACATGAATACTATTAGACTTACCTGAAAAATATAAAGCACTGTTTATTTCATTAGTATCTTTGTTCTATTATGTTTTTCTATGCTTGTAATTTGTACATTATTTTCTATGCATATTCACTCGCCTACAAAATCACCCCAATGATTCTAGAATGATTAATTCTTTCCAAATGGAGGTATTCAGGTCATCTGGTGATTTATTTTCCATATCGCAGAATATAGCACAGAAAAACAAAATATCACAGTGTCATTTTTTTTTCCAATGTCATGCGGCCCTAGTGTGAAGTATTCGAATAATTTTTGGGGCCACTGTATGTTGTGAAGGAAATTTTTAATTAATCATTACTGACATTCCCTTTTCTTGCAGGATTAAAATTTATGCTTTTGAATAGTAAATGTTGAAAATAGTAAATATTGAAAATATTTGCATGAAAGTGTATTGCATATAATATAATAAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000068_00174820_00180047.mRNA True 2030 mRNA 0.39 4 173549 180047

Neighbor


gene id symbol gene type direction distance location
CI01000068_00121327_00131615 NA coding downstream 41934 119075 ~ 131615 (-)
CI01000068_00093823_00101443 SLC38A2 coding downstream 71590 92676 ~ 101959 (-)
CI01000068_00077325_00088188 SCAF11 coding downstream 85337 76671 ~ 88212 (-)
CI01000068_00022331_00025614 FGFR1OP2 coding downstream 147019 22147 ~ 26530 (-)
CI01000068_00002352_00004092 MED21 coding downstream 169457 2111 ~ 4092 (-)
CI01000068_00236826_00238310 CHRM2, CHRM2A coding upstream 56122 236169 ~ 239165 (-)
CI01000068_00423240_00429403 PROSER2 coding upstream 242654 422701 ~ 430620 (-)
CI01000068_00442295_00444826 NA coding upstream 261603 441650 ~ 444826 (-)
CI01000068_00449335_00450163 NA coding upstream 269288 449335 ~ 450163 (-)
CI01000068_00466560_00470556 NA coding upstream 285760 465807 ~ 470556 (-)
G273074 NA non-coding downstream 57785 115503 ~ 115764 (-)
G273070 NA non-coding downstream 60484 112841 ~ 113065 (-)
G273031 NA non-coding downstream 125997 46342 ~ 47552 (-)
G273028 NA non-coding downstream 128034 44476 ~ 45515 (-)
G273041 NA non-coding downstream 158885 11908 ~ 14664 (-)
G273089 NA non-coding upstream 7352 187399 ~ 187602 (-)
G273050 NA non-coding upstream 111883 291930 ~ 309104 (-)
G273114 NA non-coding upstream 139853 319900 ~ 320216 (-)
G273115 NA non-coding upstream 142587 322634 ~ 322949 (-)
G273121 NA non-coding upstream 162632 342679 ~ 343021 (-)
CI01000068_00582352_00600267 NA other upstream 417161 582054 ~ 601519 (-)
CI01000068_00663458_00672380 DPYSL5B, DPYSL5 other upstream 482157 662204 ~ 672380 (-)

Expression



Co-expression Network