CI01000068_00423240_00429403 (PROSER2)


Basic Information

Item Value
gene id CI01000068_00423240_00429403
gene name PROSER2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 422701 ~ 430620 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000068_00423240_00429403.mRNA
AAACCCCGCCTGTCAGTGTTTATCAAATATGAAAGGCTCGGATATGTTTTCTTAGAAAATTAGGAGGAACCCCGAGTGTTCGTCATTACGAGCGCGCTGTAGGCAGATTCGCGCGCTTACGCGCTCCCGTAGAACCCGAAGAGCCAGTTCACGCGCGCAGAATCAACAGAGTCAGATTTAAAACACATTCACTCACACCGGACAGACAGAGCTGGAATGACACTCGGTTTATTCGTTTAACTTGCTCTGGTCAGCTGTTTCAGGATGTTTGGGTAAGTTAAACGTTTTTTTCCCCCTCAAAAATCTTTTACTCGTTTTAAACTCTTGAGTGTTTGGGCGAATCTCATTCAGTAGGTACCCAGGTCATTATATATTTTAATATATAAATATCATTTTATCATTATGTTTATGACAGTGAACTAAATTTGAAAACTATGTATCTCACATTAGTATTTATTGTACTGAGTTTAACACTTGAGATTTGATTAGTGTAATGAGAACGACATCGAAATGTGTTTATTGATTATTTTTATTAATTTTTAATGTAACAGAATTACTTATTTGTTTATTTTAATATGTTTTTACTTAATGAGATTAATAAGTATGCTGTTACTCATTTGTTTCTCTTTATATATAAGCAATTATTACTTCAAATCAGTAGTTTAACAAAAAAAAAAAAAAAAAAATCTAAGAACGTTATGCTAACATTCCCATTAAGTTATGAAAACGTTATTTCTAAAACGTTAAACAAGTATTTACAGATCAGATATCCCATAACAAACGTTCTGTTAACGTTACTGGAAGAACGTTGGTTCATAACTTTGCCAGAATGTTCTTCTACAGTCCTTGTTAGCTGGGTTTGTTTATTTGTTTGCATCACTATTGTTAAGCATGTATAAGTAAAAATATTCAGAGTATATAATTATTTAGCAGTTAATGTTAAATATTTACTCATAACACAAGTAAAGCTGTCTAATTGCGGATCAGGAGTGCTGTAGTCAGACCTCAGGAGATCTGTGTGAGCAAACACAATATTCCTCAGTGATCTGAGACCAGCAGCTCTTTATTTTGATGACATATATTGTGTGTTTCAGGTGCACGTGTATCATGTGAAACAGGTCATTCGGGTTCGTGGAAATGTTCAGACCATTTCACACGACCCTTGACCTTTTCTGCTCGACCTTTTCGCAAGACGCTGTGCCCTCGATGCTGTAAGCATGGATGTTCACATGCACAACAGTCGGACGCATCACTACGGGCTGAACAATGGTCCGAACCGCTTCTCTGAAGATGATCTGCAGTTCCTCAGTCTTGAGGAAAGGGAGTGTATTTTGTTCTTTGAGGAGACCATCGGCTCCCTGGAGGAGGACGATGAGAGGACGAGAATGTCCGCGGGCGGCCACAGGCTTGCGGTGGAGCGTCCGGCCTCTCACACACAAACAGCACGACATCACAGCCCTGTCGATCATGACATCATTGACCTGGTCCACCCTACACCTGATCCCAACAAACATAAAGACACGCTGCCCATCATCAGGCCAGATTTCCAAGAGCTGATCGCAGCCCCGGAGACCCATTATGAGGTGAAGGCGAAACATGAACCGCCGGCAGTCTCAGACACGCCACCAGAGGAGTTTGGACACCATCCGCCCTCAAGTTCAGTTCCCACTCCCGCAATAAGTGCCAATAAGATCGCCGAGCATGAGGACATCAGTCTGGAGTTACCGCAAAGCCCCTTGGTCAAACACGGCCCTCCTATCCACGCCAAGCCCACGCGTCTTCCCGACAGCATCAGCACGTTGCTGGGCAGCCGCGAACACATTCCCCATTCAATCGCCACAGAAGCCATGAGCGTGCAGGAGCGCCGGGCGCAAATGCTCGCTAACCTCACCGGCTCAGCACACCCTCTGGATGGCGGAGAGCCGTCATGCGTTCGCAATCTTCCCATGCGAAGCATATCGTTTCGAGATCCGACGCCGGACAAATCTAGGATGGAGGCGCTTTCGAAACTCGGACTTGCTCAGAGGCGATGCCAATCCGTCATGCACACTTCTCCGAGGGACGCCGAAAGTGTTAAAACCACCACATTAAAATCTAACTTACCAGCAAATGCTAGTGCTGACTTGCGCGCTACAGACACTACGGACCACTGCCAAACCAGGCGATCACAACCCATCATGCACACTTCTCCGAAAGACGCCGGAAATGTTAAAAGCACCACTTTTAAATCTACCTTACCAGCAAAAGCGAGTGCTGACATCCGCACTATGGACACCACGGACCACTGCCAAACCAGGCGATCGCAACCCATCATGCACACTTCTCCGAGGGACGCCGAAATCGCTAAAACCACCACTTTCAAATCTACCTTACCAGCAAACGCAAGTGCTGATGTCCGTGCTACGGACACCACGGATCACTACCAAACTAAATCTAGCCCTGCACCAATTTTGACGAGTGCCGAAATCACGCATAGTGATTTTAACAGCTATGGCGGTAAAAGCATAACATTGAACCCCACACCGTCCTTTAGGGTTGAGTGTGTCCCAACTTCATTACCCAAAACAGAGGCTTCGAATGCACATCTCAACAACTTTGGAGGCAGATCAAGAGCCATGACTACACCTGAACCAATCTACGGAGCCCGATCCAAAACCTTCTTCCCGGTAAAAGAGGACAACTCAAGTTCGAACAGGACTGTAAACGAAGACTTACCCAAGAGGAAAGGGTCGCACCCTGAAGCACCTGTAAGCAGGTCCAACACTCAGCCGCCCACTCCGGCTCCAAGACCACTGCGTCACCCGAGTCCACTGAGTCCCACCGGGCCACGTTCCCTGTCAAAGCCAAAGCCATCGCCATCCTTCCGTACTCAGGGAATAACAGTCCAGTTTTCTGGGAAAGGAGCCACAGATGAGGCCAGACGTGATGCACTACGCAAACTAGGACTGCTGAGGGACACGTCTTAAACGCTCATATACTACTAAATAATAATGTTGTGGCTCTGTGGTGTAGAGTTCAGTACAAAAACATTTGATAAGCTACAATTCAACCAGTGCTGGGTAGATCACTTACAAATTGAATACGGAGTACATATTATATGACGAAAATTGTAGTTAGTAACATAACCTATTACATTACACATTTTAGGTCATATAATATAAATACTTTTGAATATTTTTCAGATTACTGTTGACCTAACTCATTAAACACTTAAATTTTGATGTATAAAAACAAAGAGAAAGGAAATTATGTTAGGGTTTCCCAAACCAGGGTTCGTGAAGGAATTTCAGGGAGTTTCTAAGTTCATGAAAAATTAATAGTTACATTTTAAAACAAAAACAATTCAACTTAAAATACTTTCTTTACTTGCATGTCATGTGACCATTAAACGACATCAGAGAACCATGAACATGCAAACATGTTAAATTGACTTAATTATTAACTACTTAAAAACTTCAAGTAAATATATTACGTCACAGAGGATCGACCGACAAAAAATAATAAA

Function

symbol description
proser2 Orthologous to human PROSER2 (proline and serine rich 2).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000068_00423240_00429403.mRNA True 3505 mRNA 0.43 3 422701 430620

Neighbor

gene id symbol gene type direction distance location
CI01000068_00236826_00238310 CHRM2, CHRM2A coding downstream 183536 236169 ~ 239165 (-)
CI01000068_00174820_00180047 NA coding downstream 242654 173549 ~ 180047 (-)
CI01000068_00121327_00131615 NA coding downstream 291086 119075 ~ 131615 (-)
CI01000068_00093823_00101443 SLC38A2 coding downstream 320742 92676 ~ 101959 (-)
CI01000068_00077325_00088188 SCAF11 coding downstream 334489 76671 ~ 88212 (-)
CI01000068_00442295_00444826 NA coding upstream 11030 441650 ~ 444826 (-)
CI01000068_00449335_00450163 NA coding upstream 18715 449335 ~ 450163 (-)
CI01000068_00466560_00470556 NA coding upstream 35187 465807 ~ 470556 (-)
CI01000068_00478512_00488030 XPOT coding upstream 46427 477047 ~ 488902 (-)
CI01000068_00496537_00503427 NA coding upstream 65659 496279 ~ 503427 (-)
G273129 NA non-coding downstream 66028 356471 ~ 356673 (-)
G273121 NA non-coding downstream 79680 342679 ~ 343021 (-)
G273115 NA non-coding downstream 99752 322634 ~ 322949 (-)
G273114 NA non-coding downstream 102485 319900 ~ 320216 (-)
G273050 NA non-coding downstream 113597 291930 ~ 309104 (-)
G273141 NA non-coding upstream 10747 441367 ~ 441587 (-)
G273144 NA non-coding upstream 21711 452331 ~ 452563 (-)
G273145 NA non-coding upstream 22343 452963 ~ 453297 (-)
G273146 NA non-coding upstream 23112 453732 ~ 454079 (-)
G273147 NA non-coding upstream 25449 456069 ~ 456305 (-)
CI01000068_00582352_00600267 NA other upstream 166588 582054 ~ 601519 (-)
CI01000068_00663458_00672380 DPYSL5B, DPYSL5 other upstream 231584 662204 ~ 672380 (-)

Expression


Co-expression Network