CI01000068_00442295_00444826


Basic Information

Item Value
gene id CI01000068_00442295_00444826
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 441650 ~ 444826 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000068_00442295_00444826.mRNA
GAACTCAAGACATTCATACAGTCAGAAAAATATCTGTTCAAAAAAATCAAACTATCATAATCCCTTGTTTATATGATCAGAAATATGTCAATAACTCAAAATATGTGAGTTCTGGAGGTTCTTGGTACTTCAGTAGTCCTGTAACACACGGCAGAATGTCTGTTGTGGATAACCAAAAAGAAAAGGTTTTTACGGCAGCGCTGAGTAACGCTGAAGTGAGTGACACTGGCACATACTGGTGTGGGATCAGAGTATCTGGATCTGATCCTGCTGCAAAATTTTACTTGGAGGTTTTAAAAGGTAAACCCAGACTCCATGTCTCCAGTCAAAGCGTGTCAGACTATGAGGGTGGGTACACTGACGTCATCTGTCACGGGGCGTCACAGTGGTGTCAGATCGGAGGCTCTTGTGTTGGGAGGAATGGAACCTCAAATAAAACTACGGTGCATATCAGTGGTGATGATGACGCTCTGAATGTGACCTTGAGCGAACTGAAGAGAGAGGACAGTGGATGGTACTACTGCCCTGATGGGGAATCACAGATGCCGGTTCAGATTATCGTGAGGAAGGCCCCATATACAGGACGAGTCACTGTTCAATATACAGGTCACACCAGAGCATCCAGTCAAGACAAGTCTGTTCAATATACAGGTCTGTACAGTTACTGTATAGCATCCAGTCAAGAAAAGTCCGTGGGTCCGAAGCACGTCCTGTGGCTCGTCATTCTGGGGTTGATGCTGCCCATAATCGTCTGCGCAGCTGTGATACTGATCAAAGTAAAGAAGAGAAAGGCAGAAGAGTCCCTTAGGGGGCCCAACAAGGAGACTGAGCAACTCCATGTGCATGCTATGCTTTTTGAACCAAATATTATTCCATTTATATTGATACCATTTTGATTTCTTTGATCTTTGTGATGAGACTATATAGACTCAAGTGGTGTATCCCAAATGGTCAATGTTTATGATATTTTAAATTTGTACTTAATAAATAAAATTTAATAAAATAAAATTTAAAGTGTTGCCCTATTGTGTCGAAAGTGTTGCATCTTTTATTTCGAATCAGTGGTTTGGAGCGCCAAAGTCATGTGATTTCAGCAGTCTGACACGCAATCCGAACCACTGATTCGAAACGAAAGATTCGAAGCAGTGTTTTTAAATCGGCCATCACTAGATATTGTTGAAAAGTCGTTATTTTGTTTTTTAAAACAAAAAAGTATTCTCGTCGCTTTATAATATTAAGGTTGAACCACTGTACTCACATGAACTGTTTCAAATATGTTTTTAGTACCTTTCTGAACATCTGAGCTATCGGATTTCATCAAAAATATCTTAATTTGTGTTCCGTAGATGAACTAAGGTCTTACAGGTGTAGAATGACATGAGGATAAGTAATTAATGACATTATTTTCATTTTTGGGTGAACTAACCCTTTAACATACAATCCATTAACATACTGAAAGTTAAAATTAACAATTAATACGATTGACTTTGTACGAGGGACATAGAGTATTGACAAAGTAAACAGATAATACACAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000068_00442295_00444826.mRNA True 1541 mRNA 0.39 4 441650 444826

Neighbor

gene id symbol gene type direction distance location
CI01000068_00423240_00429403 PROSER2 coding downstream 11030 422701 ~ 430620 (-)
CI01000068_00236826_00238310 CHRM2, CHRM2A coding downstream 202485 236169 ~ 239165 (-)
CI01000068_00174820_00180047 NA coding downstream 261603 173549 ~ 180047 (-)
CI01000068_00121327_00131615 NA coding downstream 310035 119075 ~ 131615 (-)
CI01000068_00093823_00101443 SLC38A2 coding downstream 339691 92676 ~ 101959 (-)
CI01000068_00449335_00450163 NA coding upstream 4509 449335 ~ 450163 (-)
CI01000068_00466560_00470556 NA coding upstream 20981 465807 ~ 470556 (-)
CI01000068_00478512_00488030 XPOT coding upstream 32221 477047 ~ 488902 (-)
CI01000068_00496537_00503427 NA coding upstream 51453 496279 ~ 503427 (-)
CI01000068_00582352_00600267 NA coding upstream 137228 582054 ~ 601519 (-)
G273141 NA non-coding downstream 63 441367 ~ 441587 (-)
G273129 NA non-coding downstream 84977 356471 ~ 356673 (-)
G273121 NA non-coding downstream 98629 342679 ~ 343021 (-)
G273115 NA non-coding downstream 118701 322634 ~ 322949 (-)
G273114 NA non-coding downstream 121434 319900 ~ 320216 (-)
G273144 NA non-coding upstream 7505 452331 ~ 452563 (-)
G273145 NA non-coding upstream 8137 452963 ~ 453297 (-)
G273146 NA non-coding upstream 8906 453732 ~ 454079 (-)
G273147 NA non-coding upstream 11243 456069 ~ 456305 (-)
CI01000068_00663458_00672380 DPYSL5B, DPYSL5 other upstream 217378 662204 ~ 672380 (-)

Expression


Co-expression Network