CI01000068_00644494_00651464


Basic Information

Item Value
gene id CI01000068_00644494_00651464
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 643982 ~ 651464 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000068_00644494_00651464.mRNA
ATCGAGATTATGGCCTCTGGTGTGGGCAAATGGGAGGTGGTGAAGAAAGGAAAGAAACAGAATAACAGCTCCGGAGGAAAAACTCAGGACAAGAAATCAGCCAGGAAAGCGCTGAGAGAGGCCAACATGAGCCACACTGACACCAACCACGTGGTGTCCGAGACCATATTTGACGGTTTTGAGAAGATGTTGAAGAAGCAGAACAAGGAGCAGGTTCCTCCTCCAGTCGAAACGCAGCAGAAGAAGCCCAACGCAGGGAAACAGACCAAGAAACTCCCCACCAACGGCAGCTCCAAACCCACACACTACAAGACGCTGGAGGAGGCCGTCAAAGCCCTGGACGTGGTGGAGCTGAAGCAGCAGCTGGAGAAAAATTACCCATACTGCCTTGCTGGTAAGGAGCTGAAGGGCATTATTAAAAACCTGCTGGGCAAATGTTCAGACACACTGCCCGAGTTCTTCGACCACTGCGTGTTTACCATGCTACGAGAACAGGACCGGCAGCCAAGTGAATCTCTGCATGGCTACAGGATGTGCATTCAGGCTCTCATGCAGGACAAACCCAAAATCGCCACGCTGAACCTCGCCGACCACCTGGAGCTGCTGCGCTCCCATCAGAACCGGCCGGTCAAGTGTCTGACCATCATGTGGGCGCTGGGACAGGCGGGATTCTACGACCTCAGCCAGGGCATCAGAGTTTGGTTGGGTATTATGCTTCCTGTTCTCGGGATGAAAGCGCTCTCTGCGTACGCCATCGCTTATCTGGAGCGACTCCTGACGCTGCATGCCAACCTGACCAAAGGTTTCGGGATCATGGGGCCGAAGGAGTTCTTCCCGCTGCTGGACTTTGCTTACATGCCCAAAAATGCCCTGTCACAGAGTCTGCAGGAGCAGTTGTGTCGGCTGTATCCGCGGCTGAAGGTTCTTGCGTTCGGAGCGAAACCCGAATCAACGCTGCACACGTATTTCCCATCATTCCTGTCACGAGCGACGCCGAACTGCCCTGATGCCATGAAGAAAGAGCTCCTCAGAAGCCTGACGGAGTGTCTGACCGTCGACGGCCAGAGTTTGAGCGTTTGGAGGCAGTTATACACCAAACACCTGCCACAGTCCAGTCTGCTGTTAAATCACCTGCTGAAGTCGTGGAACACACTTCCTCCGAAGTTGCAGAAAAACCTTCAGGACACCATCCAGTCCTTCAGAGTGACCAATGATGAGCTGCAGACCAGCACCAACACACAGGACATTCATCACTGCAACACGCTCTGCCAGTCTCTGCAGCTGAAGATGCACGGTCAGGGTTTCCCGTGGTGGCGCGTGTTGATGATGGCGTTGGTGTTCGTGGCGGGCTTCATCGCGCATGACGTCAGGTCAAAGGGGTCGTTCGCAGACTCCACCACAGCGCTGTACCTGGAGAGGTCAGGGGTCACCGCCGTATCCCAGCAGGCCTGGATCAAAGTGTCGCATTACGGCCAACAGGGCGTCAGCTGGTTGGCCGAGAACACGCCGTATTATTACTCGCGCGCCGTGGAGGCCGTCGGGCCGCTGCTGGAGGACGGGCGGGACAAGGTGAAGGTGGCGGCCATCTTCATCGCACAGAAAAGCTCTGAAGTTTTACTGTGGCTGCAGGAGAACGTGCCGCGGCTGATAGAATGGGTCTATGCGAACACTCCAGAGAGCGTGTTTCAGTTCATCGAGTATGTGAAGCAGCTCCTGCTGTACATCCATGAGCGCTTCATCATCCCGTCACTGCAGTATCTGTCCGCAGCACTGCAACACGCCTGGAAGAACCTACAGGAGTCCTGCAAATATGAGCTGCAGCCTCGGCCCAGCCGTATCCCGGTGCGGAAGGACATTCAGTCCGTAGTCGTCCCGCTTACAGGCCACGAGACGCACAGCATGAGAGTGTGGAAACTGATCAAACCCGGCATCAAGAAACATCTGGCAGGTGTTTCTGGGAAAGACGGTTCATTGCGTCTGGCAACCAAAACTCTGCTGAAGAACTCTTCCTGTAGCTATCAGAGCTCTGGAGACGCTAGAGACAAACACACAAACAGGTGACAAGATACTAGAACAGGTTTTCCTGCTTGAATGTTGATTATTTTCCTCATTCTCCATTGTTCAGCTCCTCTCTTCCCAGTCTGTCAGTAACGCTCTGTTTAGTTCCTGTCTCTATGAAGCCCCTCCTTCTGAAAAGCACAATGTGCTCTGATTGGTCGGCTGGAGCTGGACGCTATTAATACTTAAAGACTTTCATCTCAACAGATCTTTGCAGACCTGAGAAGCTCTAATGGGTCATCTACAGAAGCTGCTCGTGTTTAATGGTGACTGAAATGTGGTGCTTTCCCAGCATTCAGCAGTGCTGTGGCTGTTTTAATCCTCCATAAGCACAACTACACTAAAACAACAACATGCTCAGCATCGCGTTGTGTTTCTAAAGAAATCCTTTTAAATGTGTGGCTTCGTTTTGTAATTGAAAAATTATGTTGTGGCAAAATTAGATTGTGGTGCTTATTACAGTTCAGAAAAACTGACCAAACTGTGTGTTTATGGTGCATTTAGAAAGCAATAAA
>TU309860
TATGATGTATGTATTATGTATGTATGATGTATGAATGTATGATGTATGCATGGATGTATGTATGTATGTATGATGTATGATGTATGTATGTATGTATGTATGTATGAATGTATGTATGTAGACAATGATTTAGCAGGAAATCTTTGCAGGGGCTTGTGCTCTAGTTTGAGAGACAGAACTTGACCTGATGAAGCACATTCACACGTTCAGAAGAGCGACTGAAGTGTGTAAATGTGTTTTCTGGTTTCAGATATGAGCTGCAGCCTCGGCCCAGCCGTATCCCGGTGCGGAAGGACATTCAGTCCGTAGTCGTCCCGCTTACAGGCCACGAGACGCACAGCATGAGAGTGTGGAAACTGATCAAACCCGGCATCAAGAAACATCTGGCAGGTGTTTCTGGGAAAGACGGTTCATTGCGTCTGGCAACCAAAACTCTGCTGAAGAACTCTTCCTGTAGCTATCAGAGCTCTGGAGACGCTAGAGACAAACACACAAACAGGTGACAAGATACTAGAACAGGTTTTCCTGCTTGAATGTTGATTATTTTCCTCATTCTCCATTGTTCAGCTCCTCTCTTCCCAGTCTGTCAGTAACGCTCTGTTTAGTTCCTGTCTCTATGAAGCCCCTCCTTCTGAAAAGCACAATGTGCTCTGATTGGTCGGCTGGAGCTGGACGCTATTAATACTTAAAGACTTTCATCTCAACAGATCTTTGCAGACCTGAGAAGCTCTAATGGGTCATCTACAGAAGCTGCTCGTGTTTAATGGTGACTGAAATGTGGTGCTTTCCCAGCATTCAGCAGTGCTGTGGCTGTTTTAATCCTCCATAAGCACAACTACACTAAAACAACAACATGCTCAGCATCGCGTTGTGTTTCTAAAGAAATCCTTTTAAATGTGTGGCTTCGTTTTGTAATTGAAAAATTATGTTGTGGCAAAATTAGATTGTGGTGCTTATTACAGTTCAGAAAAACTGACCAAACTGTGTGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000068_00644494_00651464.mRNA False 2573 mRNA 0.52 17 643982 651464
TU309860 True 992 lncRNA 0.42 2 644005 645121

Neighbor

gene id symbol gene type direction distance location
CI01000068_00635820_00636616 NA coding downstream 7366 635764 ~ 636616 (-)
CI01000068_00633935_00634363 NA coding downstream 9608 632967 ~ 634374 (-)
CI01000068_00621885_00631220 NA coding downstream 12520 621552 ~ 631462 (-)
CI01000068_00603672_00617563 TULP4A, TULP4 coding downstream 26419 602704 ~ 617563 (-)
CI01000068_00582352_00600267 NA coding downstream 42463 582054 ~ 601519 (-)
CI01000068_00655253_00658127 MAPRE3B, MAPRE3 coding upstream 3164 654628 ~ 658127 (-)
CI01000068_00663458_00672380 DPYSL5B, DPYSL5 coding upstream 11969 662204 ~ 672380 (-)
CI01000068_00679462_00683567 NA coding upstream 27557 679021 ~ 683567 (-)
CI01000068_00704059_00713223 NA coding upstream 52595 704059 ~ 713223 (-)
CI01000068_00713308_00716436 NA coding upstream 61844 713308 ~ 716436 (-)
G273147 NA non-coding downstream 187677 456069 ~ 456305 (-)
G273146 NA non-coding downstream 189903 453732 ~ 454079 (-)
G273145 NA non-coding downstream 190685 452963 ~ 453297 (-)
G273144 NA non-coding downstream 191419 452331 ~ 452563 (-)
G273171 NA non-coding upstream 42313 693777 ~ 694400 (-)
G273192 NA non-coding upstream 135997 787461 ~ 787662 (-)
G273042 NA non-coding upstream 299098 950562 ~ 952947 (-)
G273032 NA non-coding upstream 345388 996852 ~ 999620 (-)

Expression


Co-expression Network