CI01000068_00663458_00672380 (DPYSL5B, DPYSL5)


Basic Information

Item Value
gene id CI01000068_00663458_00672380
gene name DPYSL5B, DPYSL5
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 662204 ~ 672380 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000068_00663458_00672380.mRNA
GGCCTGGCGCGCTGCTGTCTCGGTCTCGTGCGCGCGGGAGCGTGTTTGGCGCGCGCAGTGACAGCTGTCATTGGTCGCGAGGCGGCGGAGCGGGTGCACGACAGGAGGAAAATCATCAAATACACTCGTTTAAGTATAATGGCCGCTGGCTCCGGCTCCATGAGGATTCTCATTAAAGGTGGGCGTGTCGTTAACGATGACGTCACTCAGGAGGCGGACGTCTACATCGAGAACGGGATCATCCAGCAGGTGGGGCGCGAGCTGATTATTCCCGGCGGGGCGAAGGTGATTGACGCGTCCGGTAAGCTGGTGATACCCGGCGGCATCGACACCAGCGTTCACCTGCAGCAGACCTTCATGAACGCCACAACACAGGACGACTTCTACAGCGGAACCAAGGCGGCGCTGTTGGGCGGCACGACTATGGTGATCGCTCACGTGCTTCCAGAGAGAGACGCGTCGCTGCTGGAGGCCTTTGAGAAGTGCCGCGCTCACGCCGATGCCAAGACCTGCTGTGATTACGCACTGCACGTGGGCGTCACCTGGTGGGGACCAAAGGTGCGCAGGGAGATGGAGGTGTTGGTTTCAGAGAAAGGCGTCAACTCCTTCCAGATGTTCATGGCGTATAAAGATCTGATGATGCTGAAGGACTCGGAGCTCTACCAGGTGCTGCACAGCTGTAAAGAGATCGGAGCCGTTGCCCGCGTCCACGCTGAGAACGGAGAACTGGTGCTGGAGGGGGCAAAAGAGGCTTTGGATCTGGGCATCAGCGGTCCTGAGGGGATGGAGATCAGTCGGCCGGAGGAGTTGGAGGCAGAGGCCACACACCGAGCCATAACCATCGGAAACAGGGCTCACTGTCCAGTGTACTTGGTGAACGTGTCCAGCATTTCTGCAGCTGACGTCATCGCTGCAGCCCGAATACAAGGTAAGGTGGTTCACGCAGAGACGACCGTGGCTCACTCGGTGCTGAGCGGGATGCATTATTATCATCAGGACTGGGCGCACGCTGCCGCTCATGTCATAGCTCCGCCCCTCCGGCTCGACCCCAACACCCCCGACTACCTGATTGGCCTGCTGGGCAAGACGATCTCTGCGAGCTCTCAGGTTCAGGGTGGAGACTTTAACCTGTACGAGAACCAGCGCTGTCACGGCGTCCCTCTGGTGACCATCAGCCGCGGGCGACTGGTGTGTGAGAACGGCGTGTTCACGGCCGCTCAGGGCTCCGGGAAGTTCTACCCTATGCGAGCCTTCCCTGACTTCCTCTACAAGAAGATGATTCAGAGAGAAAAGACTCAGAGTCTGCGCAGGGTGGATCGAGCTCCATATTCGGGCGATGTTGTCACGGTAACCAACTCCAGCAGGAAGGAATCGGCCACTCCAGAGGGTGACGTTCCCATGCGGGCGGCCACCAGACACGCAGGCGTACGAGACCTGCACGAGTCCAGCTTCAGCCTGTCAGGTGCTCAAGTGGACGATCACATTCCTAAGAGATCCTCTGCTAGAATTCTGGCTCCGCCTGGTGGACGATCCAGTGGCATCTGGTAACCGCCGGACTGTGGAAAATAATAAA
>TU309831
CATGCTTCAGGACGATCTCTGCGAGCTCTCAGGTTCAGGGTGGAGACTTTAACCTGTACGAGAACCAGCGCTGTCACGGCGTCCCTCTGGTGACCATCAGCCGCGGGCGACTGGTGTGTGAGAACGGCGTGTTCACGGCCGCTCAGGGCTCCGGGAAGTTCTACCCTATGCGAGCCTTCCCTGACTTCCTCTACAAGAAGATGATTCAGAGAGAAAAGACTCAGAGTCTGCGCAGGGTGGATCGAGCTCCATATTCGGGCGATGTTGTCACGGTAACCAACTCCAGCAGGAAGGAATCGGCCACTCCAGAGGGTGACGTTCCCATGCGGGCGGCCACCAGACACGCAGGCGTACGAGACCTGCACGAGTCCAGCTTCAGCCTGTCAGGTGCTCAAGTGGACGATCACATTCCTAAGAGATCCTCTGCTAGAATTCTGGCTCCGCCTGGTGGACGATCCAGTGGCATCTGGTAACCGCCGGACTGTGGAAAATAATAAAATAATCAGATGTGTCCAAACTTTGAACTGGTATTGTACATACAGATGTTTCTATCATTATTCAGTCGCGTTCTGTCAGTTCTCCGGATCACATGATGTTGCCAAAAGAGAAATGAACACGAGGAGGAAAACTATTATTCAGTATTAAAAGTGACGACATGATGAGTTCACAAAATTATATGTATTTTATAGTTTGTACATTCACAGATTGACAGTCAAGCAAACCAAGTGTGTTTTTCCCACCAGCTTAAAATGAGAAACTGTGAATCAGGTCACATGCACATACTGAACTTAGTGTTTGTGTTTATAGTGATGCCCACATATGATTAAAGTGTCTGTGAAATATCTATATTTTACATATATATATATATATATGTTTGTTGTTAGTTATGTTGGTCTTGATTGTGTAATAATGAAATATCTAAAGCGTCAGTGACTGATGTTACCCCAGTTGTTGGAAAATGTTAAAGGGTTCACCCAAAAATGAAAATTCAGTCATCATTTACTCACCCTCATTGAATGAACCTCATTGGTTCTTGCGGAAACTCAAGAGTATATTCATATGGATTAGTTTAACGATCTCTTTATGAACTTTTTGAAGCGTTACAGTGGTAGTTGTGTAGGCTGTCAGTGGAGGGACAGAAATCTCTCAGATTTTATTAAAATATCTTCATTTGTGTTTCGAAGATGAATGAACGTCTTACAGGTTTGGAACGACATAAATGATGACAATGTTTTCATTGACAATGTTTACATTTTTGGGTGAACTATCCCTTTAAATCAGTGATCTTCCCTGCTCGCACATTCCACTCACAATGAACACGGATGTGTCACAATCAGATTAATATGCTGATTTTGATGAAACAGAAACTGGATTCACCTGATCTGTGAAATCATGCACCAGAGCTTTAGAGTTTGAGCTGCACACATTCACTCCAACACAGATTCATAAGCCTCTTACATGTTTGAAAAGTCTTCTGTTGTGTTGATCAGCAGTTATAATGTCCGTGTTCTGTCCCGATCCAAGCATGAGCTAGGGCTGTTTTTATTGGTGCTGTTTTTTAAATGCGGGATTTTCATGGCGGGTCTCAGTTTATATGGTTTTGGTGTTTTTTATTTTTCAGAAAAAGCACTTTGTAATTCTGTGTTGTTTGACTTCTTCTTGACAGTGAGTCCTGAAAGTGAAAGCTTGTTTTCTTACCACATGGATAAGTGCAAAAATAAACCCCA

Function

symbol description
dpysl5b Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and microtubule binding activity. Predicted to act upstream of or within axon guidance. Predicted to be located in cytoplasm. Is expressed in central nervous system and trigeminal ganglion. Orthologous to human DPYSL5 (dihydropyrimidinase like 5).
dpysl5 Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and microtubule binding activity. Predicted to be involved in nervous system development and signal transduction. Predicted to be located in cytosol.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K07529 DPYSL5, CRAM; dihydropyrimidinase-like 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000068_00663458_00672380.mRNA False 1573 mRNA 0.59 11 663433 672380
TU309831 True 1727 TUCP 0.42 3 662204 664896

Neighbor

gene id symbol gene type direction distance location
CI01000068_00655253_00658127 MAPRE3B, MAPRE3 coding downstream 5306 654628 ~ 658127 (-)
CI01000068_00644494_00651464 NA coding downstream 11969 643982 ~ 651464 (-)
CI01000068_00635820_00636616 NA coding downstream 26817 635764 ~ 636616 (-)
CI01000068_00633935_00634363 NA coding downstream 29059 632967 ~ 634374 (-)
CI01000068_00621885_00631220 NA coding downstream 31971 621552 ~ 631462 (-)
CI01000068_00679462_00683567 NA coding upstream 6641 679021 ~ 683567 (-)
CI01000068_00704059_00713223 NA coding upstream 31679 704059 ~ 713223 (-)
CI01000068_00713308_00716436 NA coding upstream 40928 713308 ~ 716436 (-)
CI01000068_00728788_00730622 NA coding upstream 56178 728558 ~ 730622 (-)
CI01000068_00748555_00755073 SIM1, SIM1B, SIM1A coding upstream 75784 748164 ~ 755073 (-)
CI01000068_00582352_00600267 NA non-coding downstream 63730 582054 ~ 601519 (-)
G273147 NA non-coding downstream 207128 456069 ~ 456305 (-)
G273146 NA non-coding downstream 209354 453732 ~ 454079 (-)
G273145 NA non-coding downstream 210136 452963 ~ 453297 (-)
G273171 NA non-coding upstream 21397 693777 ~ 694400 (-)
G273192 NA non-coding upstream 115081 787461 ~ 787662 (-)
G273042 NA non-coding upstream 278182 950562 ~ 952947 (-)
G273032 NA non-coding upstream 324472 996852 ~ 999620 (-)

Expression


Co-expression Network