CI01000068_00827970_00830234


Basic Information

Item Value
gene id CI01000068_00827970_00830234
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 827620 ~ 830234 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000068_00827970_00830234.mRNA
ATTATGAAATGGTTCTCAAATTGGATCCTGAAAACTCAGAGGCACGGAATGAAATCCAGAAACTCCAGCAGGTCTTAGAATCGAGCGGGCAGACGACAGAGAAGAGCGAGAGCGTTACTGCTGCTGCGCCGACGGTGGATCCGTTACAACAGCAGCGTCTGGAGGAACAGAAGAGAAAACAGGAAGCTGTCGTGCAGAAAGACAGGGGAAATGCTTACTTTAAAGAAGGCAAGTACGAGGCGGCTGTGGAGTGCTACTCTAAAGGAATGGAGGCGGACGGCACCAACGCCCTGCTGCCCGCTAACAGAGCCATGGCGTACCTCAAACTCCACAAGTACAGTGAGGCCGAGCAGGACTGCAGCGCGGCCATCGCTCTGGACGCCACGTACGCCAAAGCCTTCGCCAGACGCGCAACAGCCAGAGCCTCTTTAGGGAGGATCAGAGAAGCCAAAGAAGATTTTGAGCAGGTTCTGAAGCTCGAGCCGGGAAACAAACAAGCCATAAATGAGATTGAGAAACTCACAGCGGAGATGAGCAGCAGCGGTCTTCTGGATCCAGTGGAGAACACACAGAGAAGAACCATCCAGCCCATCAACAAACCTGAACATCTCAGATCCACCAAACCCTTGCGGAGGATGGACATACAGGAGATATCACCGTCCGTTGAGCCTCACGTGTCTGCCGTCACGTCTTCACCCCATCCCAAGATCCAGAAGATCGAGGAGATCTCCAGCTCTCCGTCCAGGGCTTCGTCTGCAGGTCCTGAACCGATTCCTCCTCCACCCAGCAACAGTTTTCAGCTGGAGGCCGACCTCAGGAAGATCAGCCGGCACCCACAATCCACTTACAGATATTTAAAGCAAATCAGCCCAGACGCTTATCCGAAGATCTTCCAGAACTCTCTGGAGCCTGATGTTCTCAACCTCATGCTCAAGACCTTCCACAGCTTCTACATTCAACATGAAGATGCGTCTCTTCTGCTGGCCGTCCTGAGGAGCCTGGCGAGTGTGAGGAGATTTGACATGGCCGTCATGTTCATGTCGCCCACGGAGAAGAAAATGCTGCAGGAGCTGTTTGACTGGATTCACCGCGCTGGTCTGACAGACCCTTCAGTTCAAGACCTACGGAAGAAATACGGCCTTTGACCTCTGACCTCTACAGGAACATCTGTTTACAGTGTTTGAGCTCTTAAAGTCAACTGGCTCTCAGCCGTCTCACACCCGAACCAAAGTGATGTGAATGAATAAGATGCCTCAGAACGGACGCTCGGTGCCTTTAAACTGGTTCATTTTATTCCTTTGTGTGTTTGAAGACATTTGTGTTGCTTCAGTTCATGTGTCTGTGTCGATCTTGTGTCTGACTGGTTCTGGATGATGGAACGTCTTTCAGAATCTGCTCCTGTTGTTCTGAATGCTGCAGTATTAAAGTCAACATGAAATCCAAATGGACTCATTCTTGTTCATATTGTAAATGATTCATTCAGTACACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000068_00827970_00830234.mRNA True 1495 mRNA 0.50 11 827620 830234

Neighbor

gene id symbol gene type direction distance location
CI01000068_00748555_00755073 SIM1, SIM1B, SIM1A coding downstream 72547 748164 ~ 755073 (-)
CI01000068_00728788_00730622 NA coding downstream 96998 728558 ~ 730622 (-)
CI01000068_00713308_00716436 NA coding downstream 111184 713308 ~ 716436 (-)
CI01000068_00704059_00713223 NA coding downstream 114397 704059 ~ 713223 (-)
CI01000068_00679462_00683567 NA coding downstream 144053 679021 ~ 683567 (-)
CI01000068_00835450_00835656 NA coding upstream 5085 835319 ~ 835656 (-)
CI01000068_00847176_00865067 LRIG3 coding upstream 16440 846674 ~ 866781 (-)
CI01000068_00902023_00912480 NA coding upstream 71310 901544 ~ 913493 (-)
CI01000068_00919068_00936117 ETV6 coding upstream 88507 918741 ~ 936595 (-)
CI01000068_00954838_00955167 NA coding upstream 124182 954416 ~ 955783 (-)
G273192 NA non-coding downstream 39958 787461 ~ 787662 (-)
G273171 NA non-coding downstream 133220 693777 ~ 694400 (-)
CI01000068_00644494_00651464 NA non-coding downstream 182499 643982 ~ 651464 (-)
CI01000068_00582352_00600267 NA non-coding downstream 227917 582054 ~ 601519 (-)
G273042 NA non-coding upstream 120328 950562 ~ 952947 (-)
G273032 NA non-coding upstream 166618 996852 ~ 999620 (-)
CI01000068_00663458_00672380 DPYSL5B, DPYSL5 other downstream 162724 662204 ~ 672380 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location