CI01000068_00902023_00912480


Basic Information

Item Value
gene id CI01000068_00902023_00912480
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 901544 ~ 913493 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000068_00902023_00912480.mRNA
ACACTTTTGTCAGAGAACAAGTTGATGCTGATGCGCACCGAGAGACGAGACGCGGGAGGAACTACAGCTGGGATTGACGAGGAATGATGAAAACTATAAAAGGAAATGTAATGAAATAAGTCAGTCTGCTTCTCCAGTAAATGCTTCTTGATTTAAGAATGTTTAGATGTTTGTGATGGAAAACAAACAAACTGAGGAAGAACATCTTTTAGATGTGGACCAGTCAGTTTTCCAGGCAGATTTGCAGGTGATGGAAAGGTCCTGTCGAGGTTAAAGGTCAAGCTAGTTGATTCTGGAAGCTGTTGTGTGGTTTCTCAGGCTCTCAGCGAGACTCGCGGCCCACTTTCTGGACAGAAGCATCCGTGAGAAACGAGAGGAAAATGCGTCTTCAAATGCATCTAAAACACAGACAATCAGCTGCTGTGCTTCCATTCAGAGTTCTTCTGAACACACGTGTGTGTGATTATAATTAACGTTCAGCTGAGCTTCATCTCTCAGAGGTGTAATGAAAACACAAAGCATGCTGGGATGTGTTTCTAATGGCCCGACGCACTGCTGACGAGACAAAAACAGCAGCAGGAAAGCCAAATATGATTATTAACCAGAGCTTCAGAGCTGGAGAACATGACGTGTTCACATTTATCTTTCAAATATTTCTTTAATTTGCTCTGAAGCTCTAGAGAATTGTTTGGCTGTTTTGTCTCTTAAAATAAAGGATCCAAAAGGGAGGAAGAGCATCATGTTTGCAGCGTTGAAGGTTCTCGTGGCAGATGTGAAAACAGGCGGGCGCATTATTTCTGTGTTTCTGAACCGTGTTGGTTATTGATGCTGCCATCAGAAAGAGAGCAATTAAAACCAGATCAGAAATAGAGCGTTCATACGACACCGAGAGATTGATCAGTGTGTGTGAGGAGGAGATAATGGTGCTCACTGAATCTCACACACATTGATTGAAACTTCACACTGGAACGAGAGACGAGAGAAACTGACGCTCGTCTCGCTTGATTCTCCTGATGTCTCCACGTGAGAAACACCTCGGATTGAGGAATCCTGATCAGCTCTTCAATGTCAATGTCTTACATGCTGTACTTCTACATGAAATCAAAAGTGACTTTAATTTTTTGGCATGTGAACGTCGCTTTGTGTTGATTTCAGGGATGAGTGAGAGAGTTCTGCTTCTGCTGCTGCTTCTCCTGGGATCTTCAGCTCATTCCCGGGAACATCAGGGACAAGTGGCGGGAACGACCAGAGCGGCTCCGTCCTGCGTGGACGACACCTGGAGAGACGTCTGCGTCACGTCTTCACTCACGGACACATTCAGACGTGAGCTCCGGACTGCAGGACACAGGTTTGGTGTTAAGTGGGAATATCACAGGATCGCGAGAGACTCCATGAACTCTAAAGACAACGCTTGTCAAACAGCGGATGAGCGGCTCGTCTCAGGGTTTGTTCGGTGTCTGGATGTTTTCCAGCGGAGCAGGAAGTCCTTAAATTACCCTCAGTTAGTGTCTCTAATCAGCGTCCCGGAGGAAGACGGTTCTGCAGCGGGACTCATACGTGTCAGACTGGATCAGAATGATGCTGAACAAACACTGAACAGACGCTGCTCCGCTAAGTCTCCACACATTCGCGGCCTCTGGACTCCAGGCGCCTGTGGCTTCAGGCGAGCCGCGTCCTTCTCTCCGGATGGATGTAGCTCTGATCTCCGGGATGTCAGCGGGCAGCCGAACCTCTCGACCGCCGGAGGACTGGAGCTGATTAGCATTGCTCACGGCACTCAGTCTGCGTGACTCCAGAAGTTTCTGAACGCTGGAGCGAAGAAGCTCCAAAACGCTGCTGTCCAAAGGTACAACTTTAGCTTGTTAAAGGGATAATTCACCTACAAATGAAAATTATCCCATGATTTACTCATTCTAGGTGTATATGACTATCTTCTTTCAGACGAACACAATCAGAGTTATGTTAAAAAACATCCTGGCTCCTCTAAGGTTTATGATGGTAGTGAATGGGGGGCCGCGTTTTGAAGTCAGAAATAATGCATCCATCCATCATAAAAGTAATCCATATGACTCCAGGGGGTTAATAAAGGTCTTCTGAAGCGGAGCAATGGGTTTTTGTAAAGAAAATATCCATATTTGAAACTTTATAAATTCAAATAACTAGCTTCTGGTGGGCGACCGCACGCAGAATGCTACTCTGAACTTCTATATTTCGAACGACTTTTAAAATTATATCTTTATCTTTATAGTCGTCCTTGTCGTCCATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000068_00902023_00912480.mRNA True 2269 mRNA 0.46 7 901544 913493

Neighbor

gene id symbol gene type direction distance location
CI01000068_00847176_00865067 LRIG3 coding downstream 34763 846674 ~ 866781 (-)
CI01000068_00835450_00835656 NA coding downstream 65888 835319 ~ 835656 (-)
CI01000068_00827970_00830234 NA coding downstream 71310 827620 ~ 830234 (-)
CI01000068_00748555_00755073 SIM1, SIM1B, SIM1A coding downstream 146471 748164 ~ 755073 (-)
CI01000068_00728788_00730622 NA coding downstream 170922 728558 ~ 730622 (-)
CI01000068_00919068_00936117 ETV6 coding upstream 5248 918741 ~ 936595 (-)
CI01000068_00954838_00955167 NA coding upstream 40923 954416 ~ 955783 (-)
CI01000068_00969924_00981247 TIMP3 coding upstream 56410 969903 ~ 981314 (-)
CI01000068_00994252_00995274 NA coding upstream 80493 993986 ~ 995602 (-)
CI01000068_01000564_01002162 RERG coding upstream 86795 1000288 ~ 1002162 (-)
G273192 NA non-coding downstream 113882 787461 ~ 787662 (-)
G273171 NA non-coding downstream 207144 693777 ~ 694400 (-)
CI01000068_00679462_00683567 NA non-coding downstream 221339 679021 ~ 683567 (-)
CI01000068_00644494_00651464 NA non-coding downstream 256423 643982 ~ 651464 (-)
CI01000068_00582352_00600267 NA non-coding downstream 301841 582054 ~ 601519 (-)
G273042 NA non-coding upstream 37069 950562 ~ 952947 (-)
G273032 NA non-coding upstream 83359 996852 ~ 999620 (-)
CI01000068_00663458_00672380 DPYSL5B, DPYSL5 other downstream 236648 662204 ~ 672380 (-)

Expression


Co-expression Network