CI01000068_00919068_00936117 (ETV6)


Basic Information

Item Value
gene id CI01000068_00919068_00936117
gene name ETV6
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 918741 ~ 936595 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000068_00919068_00936117.mRNA
ATTCACTGATCTGATTCCGGATCAGCGCTGTTGTTTTAACTCGGAATATCGGGCTGATCCGGTGTCCGTTCAAAAAGGCCGCCGTTCCGTGACTGAAACACAAACACACGATTTCCTGCGTCGAGTTTCCCTTTAAGGCGCCGCGCGCTGCCTGGAATTCACGTCATTTCGCCGCGAAGCGTCCGGATCAATGAGGTTCCGCGCTGAGCGGTGCGTTGCGCTCCTGCGAGCGACGCTTCCAGGAAGGTGTTAACCATCGCGCTGCCGCAATGTAGCGCCTGTTTGCGCGTTTACAAACAAGAGCACGGAGAAGTTGAAGTGTTGCGCGCGGGGCGAGGCCAATGGATGCGCGAGCGAGTTAAAAATCGCCAGTGCGTCGCGAGGGGAACATTATCCTGGCGCTTTTGCGGCTTTATTTCACGGAAGAACAAGGGAGAGGAAAGTGGAAACAGAAGAACTTCCTGAATTTCAACGCGACATGTCCGATTCCCCCTCGCAGGTCATTATTAAGGGTCATGTGAGCAGCTTCATGTTCATTGAGCACAGAACAGCTCTGAAGGAAGTTCATGCCGCTGTCAGGAGAGGAGTGCTTTCAGCCCGTCCGCGAGCCCGTTGCCAAATTCCACTTCCTCTCCCGGCCATGTCCCGCCCTCATCGGCTAATGCCAGGACAGAAGAGGAACCGACCAGACTGCCGGCACACCTGCCGCAGAAGTAAACGTCTGTCCGTCCTTCTCTTCTTTGGACTCCTGATCCGGTTAGAGCAGTTATTCAGGAAGTTAGTTATAAACCCGTATTTGAGATCTGAGCTACAGACGAGACGAGGGGGGAGAGGGGAAAATGACAGGAACTTCCGAGAAGCTCTTTTGGCTCGAGGCGTCTCTGTTTTCCTGACAGTGATCGAATCGGCCGTTTTCCAGCAGGACTCATTCAGTGTGATGGAGGGATGGAGGGATGGACGGCACTTCCTGCACGCCGCTTTTTTTCTCCTCCGCTCTGAAAGGGAAACTGTTCTCACATGCCAACGGCCGAGAGCGAGCGCAGCCCAGCACTTCCTGTTCCCAACCGACTGCACATGCACACGGCCGCTCGGAAACGACAGACTATTCCAGCTCTTGATGAGCGTCTCTGTGTTCATGATCTGTGGCATTAATGCTTTTAATCATAGGATGCAGCCGGTGTTCTGGAGCCGTGAGGACGTGTGTCAGTGGCTGCGTTGGGCTGAGAGGGAGTTCGCACTGCGGCCCATTTCCAGCGGAAGCTTCCAGATGAACGGCAAAGCCCTGCTGCTGCTCACCAAAGAGGACTTCAGATACCGCTCTCCACACTCAGGAGACGTGCTGTACGAGCTCCTGCAGCACATCCTGAAGCAGAGGAAGCCTCAGTCGTATTTCCCCGTCGGCTCCTTCCACACGCTGAACGAGACGCCGCTGCTGCACCACAAACATGAAGAAACGGTACGCCGGCCGGCGCGCGGTACAGACGCTCTGTCCCTGCAGCCGCCCACCATCGAGCTGCGCCACCGCTCACGCTCGCCGCATCATCACCCGCCAGCCCTGCGCTCGCATCCCGCCTCGGCCGAGGACCTCCAGCTGGCGTCCGCGCAGCTGCCCGACAGCAACCACCACCTGCCGGACGACATGTACCCGCTGTCCGTGTCTCCCGCCGCCCCCAACGGCCACTGTGTCCTTCCCCGCGACGCCGCTCGGCCCTCTAGCCCGTGTGCGGAGGAGGCCACGCCTCCCCGCGTCATCCAGCTCATGCCCAGCGCCATCATGCACCCGCTGCTGCTGAGCCCGGGCCGCGGGCCCACGCCGGGCGACTTCAGGCACAGCCGCGGCACGCCTCAGGAGAACGGGCGCGAGGGCAAAGGTCAGCAGCAGAGCGCCGTCCACTACGCGCCTCACGGCCTGAATCTCGCGGCTCACCAGCTCCCCCTGCAGGACGAGCGACACTACCGCAACCAGATCATCATGCCTGTCTCGCCACCTGAGGAACAGGCCACGCCCATGGGACGCATCGCAGACTGCAGGCTCCTGTGGGATTACGTCTATCAGCTTCTGTCGGACAGTCGCTACGAGAACTACATCCGCTGGGAGGACCGCGATACCAAAGTCTTCCGTATCATGGACCCCAACGGCCTGGCCCGCCTGTGGGGAAACCATAAGAACAGGACCAATATGACGTATGAGAAGATGTCGCGAGCGCTGAGACACTACTACAAACTCAACATCATCCGGAAGGAGCCGGGACAGAGACTGCTGTTCAGGTTCATGAAAACCCCAGACGAGATCATGAGCGGACAGACGGATCGTCTGGAGCACCTGGAGTCGGACACAGACGAACAGATCTACGTGAAGGAGGAATGCTGAGCGCCGCGTGAACTTCTCAAGCCGAAGATGCCTCGGTCCGTCTGACCTCTGAACTCTGTGTCGTCACGACGATCTCACACTGCACTGCTCTCGGTCCAAACCTGATCTTACTCTGTTTTCTAGTCTTGTACTTCAACTTCAGCAAACTTCACGGTGACAATCATTTTAATGACAAACGATGCTCTTTTTTGCAAATCAGATCTAGAAATTGTTGGTGCAGCTTTTTAATTCTCTTTGGTAAGTATATTGTACGAAGACCTGTTGCGATTTGTATAAACGTGGGATTACTAGAATGCTGGTGAAAATGTGATTAAATTCTACAATAAA

Function

symbol description
etv6 Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Acts upstream of or within embryonic hemopoiesis. Predicted to be located in nucleus. Is expressed in several structures, including brain; germ ring; intermediate cell mass of mesoderm; mesoderm; and renal system. Human ortholog(s) of this gene implicated in hematologic cancer (multiple) and thrombocytopenia. Orthologous to human ETV6 (ETS variant transcription factor 6).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000068_00919068_00936117.mRNA True 2698 mRNA 0.57 12 918741 936595

Neighbor

gene id symbol gene type direction distance location
CI01000068_00902023_00912480 NA coding downstream 5248 901544 ~ 913493 (-)
CI01000068_00847176_00865067 LRIG3 coding downstream 51960 846674 ~ 866781 (-)
CI01000068_00835450_00835656 NA coding downstream 83085 835319 ~ 835656 (-)
CI01000068_00827970_00830234 NA coding downstream 88507 827620 ~ 830234 (-)
CI01000068_00748555_00755073 SIM1, SIM1B, SIM1A coding downstream 163668 748164 ~ 755073 (-)
CI01000068_00954838_00955167 NA coding upstream 17821 954416 ~ 955783 (-)
CI01000068_00969924_00981247 TIMP3 coding upstream 33308 969903 ~ 981314 (-)
CI01000068_00994252_00995274 NA coding upstream 57391 993986 ~ 995602 (-)
CI01000068_01000564_01002162 RERG coding upstream 63693 1000288 ~ 1002162 (-)
G273192 NA non-coding downstream 131079 787461 ~ 787662 (-)
G273171 NA non-coding downstream 224341 693777 ~ 694400 (-)
CI01000068_00679462_00683567 NA non-coding downstream 238536 679021 ~ 683567 (-)
CI01000068_00644494_00651464 NA non-coding downstream 273620 643982 ~ 651464 (-)
CI01000068_00582352_00600267 NA non-coding downstream 319038 582054 ~ 601519 (-)
G273042 NA non-coding upstream 13967 950562 ~ 952947 (-)
G273032 NA non-coding upstream 60257 996852 ~ 999620 (-)
CI01000068_00663458_00672380 DPYSL5B, DPYSL5 other downstream 253845 662204 ~ 672380 (-)

Expression


Co-expression Network