G273041


Basic Information

Item Value
gene id G273041
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 11908 ~ 14664 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU309858
CTCATTATTATTTAGCTTCACTAATGGAGAGAGTGTTGAAATGGTCATAAAACTCTGAATGGACTGTTTGTTGTGCAAGAAGCCTTGACTAACATTGCAAGTGGAGAAATTATGCATCATGTGACCCCTTTAAAAACATGCCATCCATTTGAGTGTTCAGTAACTATACTATATTTGTAACTATAATATGTCAAACTTTGACTCTTCAAATCTGTGGCAAAGACTTTCCCAGACCGAAAATACTTGGGTGTCTTTAGTAGATCGACAGATATTAATAGCAGTACCAGGGTCTGTTTCTAAGATAAGAAAAAAAAACATCACTCACCACATTTGAAGAAGCGATGGCCCACAAAACACACAAACAGCCCAGCCAAACCCATCAAAGTGAAAAACACTTTAGTGGAAGCTCTCCCTGCCAAAATGAGAGTATAATACCACATAATTCTATCACACCAAAACATGTCAATATGAAATCATCGTTCAATCAATAACCTTTTTTGTAGCACATTTAAAAACAACAGAGCTTCACAATAAAAGCAATAAGTATACATTAACAAAGTTAAAATATAGCTGCAAGCAGCAATTAAGGGGCCAAGCACAAAGAAGGCACAATAAGGCATGCCATCATGGCTGGGACCATCAGACTAAATGAAACAATGAGCAATTAAAGACCCATTAAGATCATTTTAGGCTGAAAAATTATAAATATAGTCAATTTTAATACGATTTAATCGTTCATCACTTTTTACTAATAGGTGGCGCTGTGACCAAATTGATGTGGTGTGGTCAGAGTGAGGTGACAATGACGCATGCAAAGTTTGGTGTCAATAAGCAAAAGCACTGCAGATATATACTGTCTTTAGAGTCGTTTTGGCATCATGCCTCAACTTTGTTGCTGCGTCCATAACTTTTTGCCAGCATGGTCTGAAGATGATATGATTCAATTTTGGTGAAAATTGGACCAATGGTCTAGGAGGAGTTTGAAAAAGTAGGTTTTTAAAGAAAAACAAAATGGCGGACAAGAAGTTCGGCCGACTATGGCAAAATTTCATTACAGTAGGCAAATTTATTCAAAAGTTATTAGTATTTTTGTAAATTTCAGTATAACTTTTGACCACAAGGTGGCGCTGCCCCAAAACCTTTTGAGTACTGTTAGGGCATGGTGCCGAAGACCCATACCGAGTTTCATAATGATACACTAATGTGTTCACAAATTTTACTACAAAATTCAAAATGGCCGACACCCAAAATGGCAGATATGGGAATATTGGATGATTCGACTCGGCATGATGCCCCAAATATAACAAGATCACTTTTATGATTTTTGGACAAACCATTCAGAAGTTATAAGCCAAAACGCAGCATGTTACCTCAGGTCATGCTTGTGATGACATGGACCAAGTTTGGTCTGAATACGCTAAAGCTTTGAGGAGATACAGCCTTATGTCTATTTTCCCCAAGCGCTACATGAAATTTGGTTGCATGTTTTTCGAAAAACATTTAACAAATCAAATTAAGAAATTGAATTCCATAACTTTTTGTCAGCATGGTCTGAAGATGATCTGGTTCAATTTTTGTGAAAATCGGAGCAAAGGCCTAAGAGTTTGTAAAAGTAGGTTTTTCAAAAAAATTCTCATGATGTCATAGCAATCGAACTGTATTAAGCCAAGGAATCAGAGGAAAAAAAAATATAATATTGTGGAGAGAAAATTTTGTTTCTAGCCCTTACGGTTAAAAAGTTATTAGCATAAGCGTGAGTGCAACTGTGGACAGTTGGTGGCGCTAGAGGGATTGAGTTAGAGACTCCAAATTTGCTATGGAGACAGTTCAGACCGTCCTCTATCTGTGTGCCAAATTTCAAAACTTTTCCGCAAGGGGTTCTATGGGCTGTCATAGACTACCAGAGCAGAAGAACAAGAACAAGAATGTCAACGATTACAATAGGTGCCGAGATTTACATATGAAGGAGGAAACAATGGTGTTTGTGGCTCACGGTATGTCATTTCCATGTACAGAACTCTAATTATTCAACTATGCCAAGGTAAATACAATTTTCCATTCTATGGCACCTTTAATAATGTATACTCAAACATTCAATAAACAAACAGGAAAAAAAAAAAAACAAAAAAAAAAAAACATTTGAATAGCCAGTCAAACCATAAACCTGTCATAGAATCTATTAAAAAGCTAATGTTTTCAAGTAGGATGTAACAGTTGCAGCTGAAGGAGCTGACCTCACAAACTAAAGAAATTTCTAAATTTATGAATAAAATAATTAAGCACGAATCTACAGCGAATCTCTGCAGGGAGTCGTTACTCTTCTAACCTAAATCGCTGCATCCGTCCAGCGTGGAGTTGAAGCTGCAGGCGTAGGTGTGAACAGGGATGTAAGACGCCGAAGTGTTGAGCAGTGGATCTCTCACAATCACTGAGAAAATCACACCTTGACCGGGCAAAGAGTTGAAGGAGAATTGCTTCCGGTCATGAGAGGATAAAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU309858 True 2500 lncRNA 0.37 2 11908 14664

Neighbor

gene id symbol gene type direction distance location
CI01000068_00002352_00004092 MED21 coding downstream 7816 2111 ~ 4092 (-)
CI01000068_00022331_00025614 FGFR1OP2 coding upstream 7483 22147 ~ 26530 (-)
CI01000068_00077325_00088188 SCAF11 coding upstream 62007 76671 ~ 88212 (-)
CI01000068_00093823_00101443 SLC38A2 coding upstream 78012 92676 ~ 101959 (-)
CI01000068_00121327_00131615 NA coding upstream 104411 119075 ~ 131615 (-)
CI01000068_00174820_00180047 NA coding upstream 158885 173549 ~ 180047 (-)
G273028 NA non-coding upstream 29812 44476 ~ 45515 (-)
G273031 NA non-coding upstream 31678 46342 ~ 47552 (-)
G273070 NA non-coding upstream 98177 112841 ~ 113065 (-)
G273074 NA non-coding upstream 100839 115503 ~ 115764 (-)
G273089 NA non-coding upstream 172735 187399 ~ 187602 (-)
CI01000068_00582352_00600267 NA other upstream 582544 582054 ~ 601519 (-)
CI01000068_00663458_00672380 DPYSL5B, DPYSL5 other upstream 647540 662204 ~ 672380 (-)

Expression


Co-expression Network