XLOC_010466


Basic Information

Item Value
gene id XLOC_010466
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 10012985 ~ 10013605 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022118
CTGGAGCTCACAACAGAGCCCAAATTTCTGTATTTGGAGCGGCTTCCAGATGCTCCAAATACAGATCAGGAGGGAGGTGGAGCAGAGGTGGAACAGGGGGAGGGAcagagggccaggaccatgcagcagAGGTGtacctggagcatggagctgtggAGGACCTGGAGCATGTTGCAGAAAGCATTGAGAAGTCACACGGCTCTGGCAGTCATTCGTGGGACTCAGGTGGTGGCTCTGGCCTTACGTGGGACTCGGGTGGTGGCTCTGGCCTTTCGTGGAATTCAAGAGGATCTGGCACCCCTGGCCATTCGAAGACTTCCAGAGGATCTGGTACCCCTGGCCATTTGGTGAATTCGCTGCTTGCAATGTCCTCATTGACAGCTGTCATGATTACTTGGGGACTGAAGAGAAAATGGAAAACATTGATAAGCAGAAGAAAGAAGTGGTTTGCATCTGTCAGAAATTGCTGCCAGAAAGTGGTGGCTGCCTTCCTGATATGACTGAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022118 True 505 lncRNA 0.53 2 10012985 10013605

Neighbor

gene id symbol gene type direction distance location
XLOC_010465 id4 coding downstream 32583 9977858 ~ 9980402 (-)
XLOC_010464 ncalda coding downstream 115216 9833256 ~ 9897769 (-)
XLOC_010463 grhl2a coding downstream 182534 9807263 ~ 9830451 (-)
XLOC_010462 tapbpl coding downstream 209987 9787383 ~ 9802998 (-)
XLOC_010461 NA coding downstream 251232 9759176 ~ 9761753 (-)
XLOC_010467 cep76 coding upstream 12291 10025896 ~ 10053049 (-)
XLOC_010468 ptpn2a coding upstream 41887 10055492 ~ 10071887 (-)
XLOC_010469 cep192 coding upstream 83517 10097122 ~ 10261652 (-)
XLOC_010470 flot1b coding upstream 273983 10287588 ~ 10316359 (-)
XLOC_010471 si:ch73-54f23.4 coding upstream 383835 10397440 ~ 10404383 (-)
XLOC_010626 CR392024.2 misc upstream 10881507 20895112 ~ 20895175 (-)
XLOC_010458 FO704756.1 non-coding downstream 446614 9564503 ~ 9566371 (-)
XLOC_010455 CR394537.1 non-coding downstream 710791 9302079 ~ 9302194 (-)
XLOC_010452 NA non-coding downstream 1333523 8668981 ~ 8679462 (-)
XLOC_010450 CU062417.1 non-coding downstream 1533976 8478880 ~ 8479009 (-)
XLOC_010472 NA non-coding upstream 407565 10421170 ~ 10429893 (-)
XLOC_010473 NA non-coding upstream 412142 10425747 ~ 10428540 (-)
XLOC_010477 NA non-coding upstream 836101 10849706 ~ 10859614 (-)
XLOC_010478 CU468227.1 non-coding upstream 902685 10916290 ~ 10916404 (-)
XLOC_010479 NA non-coding upstream 903979 10917584 ~ 10919434 (-)

Expression


Co-expression Network