CI01000069_00029366_00037113


Basic Information

Item Value
gene id CI01000069_00029366_00037113
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 29357 ~ 37566 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_00029366_00037113.mRNA
ACAATTGTTTTATTTAGTTATTTATTTATTTTTTATTCATTCGTTTTTGTAATTGAACAATAATGAGTTCTGAAAAACATTCAACCTCATGGATTTGCATATATTTTCAATGAAGACAGCATGGGATGCGTCTCAAAATCTAGCGAGCTGCCTACCTAGACAGCATCACAGGCGCGTTCTCAGTCATCTGACGCCTATGAGGCCCAAAAGCGCGGTCTGCGTAGCCAGTTCACTAGATTTTAAGCCAATCCGTGTGTGTGTGTTTGTGGCTCTAGGGAGGATGGTTAGGTAATATCCGCAGGATTGAACCGGGGAAAGTTGTTTCCTGAACTCTTGGTGCAGTTTGTTGAAGCCCGGCCCTGCAGCACTTCACACAGGAAAAGGAAGACGGATGCAGACGCAGGGAAAAATATCGAAACGAAAAGAAAATATCGAGACAAATGACGTGAAACCATGGAAGTGGCGGACACACCAGCATCGCGCAGTGAGGAGAATGATGTAGAAGACCTGCAGACGCAGCTAATCGAGTGCCGAGCTCAGCTGGAACACTGGCAGGGTGTGGCGAGGATCTGTGAGCTTAGCAAACAGGAGGAGTTGCAGGAACTGCAAAAACAATGCGACCAGGAGATTCAGTCCTTGCAGGAGGCTCTGAGAGAAACAGCTGCTCAGTATGAGGCCAGAATATCTGTTTTGCAGTCAGAGCGAGCACAGTGGAGGAGAGCCGCTCTGCCCCATGACACTAAGGGCTTCTTTAAAAAGGGCAAGCTGGAGGGTACCTCTCCCCCCAGTGAGGGGCCACAGGGTGACTCCTCTCCCCCACGAGGTTCTGACCATGAGGGCTCAGGGTCAGACTCTGATCCACTGGAGCTGTTGGCAGAGACGTCAGATGCAGAGACAACAGGCCTTATGATGGACTACTTCCCCCAGCATTGTGACTCTGCCTCCCTGTCTTCTTTCTCTCTGGACACGCCCTCCATGCCACGACATGCGCACCCTCAAGATGACACCGCCTCCCTGGTGTCCACAGGAACGCTGGTGCCTGAAGCAATCTACCTGCCACCACCAGGACACAGACTGGTCACACATACCGACTGGGACAAATTGCAAGCACATGTCTTTTTTTGCAAAAAGGAACGGACAAATTCAAAAGCACAGATATGCAAAAAATTATTTTACTACCTCTTATGTCTGGATTGCATTGCACTCATGAACTGTATACTCCTCTTTGCAAGATACAGAAATAGTGATACAGCTTTATGCAATATACTACTGTTCAAAGCTTTAGAGTCGTTGACATTGCTTCAGTCTCAGGTGCAGACTTCTGAGTCCCTCCTTCAAGACCTACAGAAATCTTTTAGCCAGTCACAAAATGCCGTTCAGAGCAGATTGGCAGAGCTGTCTTACTCTCAGAAGAGAGTCTGTAATGAACTCTCCAAGTTGAAAGGTGAAGACACTGATGTGGATGAAAGTAGCCTGCCACCCCCCAGTCCAACACTAGAGCTGGAGGCTGAGCTGCAGGAGTGTCGCGTGGAGGTGCAGGGTCTGCGAGTCGCGCTTGCTCACATTCAGAAAGAGAACAAATCTCACATTCACGAGAAGGCGGTGTTACAGCAGCAGTGTTTAGAGTGTCGCAGTCAGGTGATCAGTCTGCGCTCTCTACTAGACACTAGTCAGGCTGTGCAGAAGGATTTTGTGCAGCTGTCACAGTCACTGCAGGTGAAATTAGAGCAGATTCGGCAAGCAGAATCATTGAACCAAGTCAAGCAGATTCTAGGGGAAGAGATTGAGGAAGAAACTGATTTACCTGCAGATGCCACATGAAACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_00029366_00037113.mRNA True 1830 mRNA 0.48 10 29357 37566

Neighbor

gene id symbol gene type direction distance location
CI01000069_00000091_00001650 HSPA6, HSP70B, HSPA1B, HSP70A, ADA, HSP70.1, HSP70.3, HSP70.2, HSP70L coding downstream 27084 91 ~ 2273 (-)
CI01000069_00041648_00043198 EHD3 coding upstream 4082 41648 ~ 43441 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC coding upstream 6387 43906 ~ 52896 (-)
CI01000069_00059923_00065619 MAPK3, MAPK1, MK03 coding upstream 22287 59853 ~ 66016 (-)
CI01000069_00070778_00073734 BRAFLDRAFT_264576, BRAFLDRAFT_218264, BRAFLDRAFT_218328, PPP4CB, PPP4C, PPP4CA coding upstream 32930 70496 ~ 74403 (-)
CI01000069_00142555_00146746 NA coding upstream 104757 142323 ~ 147185 (-)
G273493 NA non-coding upstream 10734 48300 ~ 48503 (-)
G273488 NA non-coding upstream 28732 66298 ~ 66999 (-)
G273482 NA non-coding upstream 62154 99720 ~ 120649 (-)
G273483 NA non-coding upstream 113970 151536 ~ 154085 (-)
CI01000069_00952894_00955774 NA other upstream 775669 952361 ~ 955790 (-)
G275178 NA other upstream 889357 926923 ~ 945804 (-)
CI01000069_01645966_01647142 NA other upstream 1608202 1644522 ~ 1647326 (-)
CI01000069_02589498_02621318 SYT3 other upstream 2573609 2589469 ~ 2621641 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026360 rabep2 coding NC_007114.7 CM002887.2 26157073 ~ 26171668 (-)