CI01000069_00564614_00567490


Basic Information

Item Value
gene id CI01000069_00564614_00567490
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 563530 ~ 567576 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_00564614_00567490.mRNA
AGAACACACTACCACCCAGTTTGACCCAACCTGACCCTAACTACCAGTGTTGAGCAAGAAGGAAAACCTCAAAGTAAACAAGGGATATGAGGGGGAATGTTTTAGTGTGTACGTTTGACATGGCCTGTGGTTTCAAATGTCGGCCCAAAGATATTTCAACACCATACCAGGCAGTTTTGGCACAAGGGATTCCTCATTTTGTAAAAGGAGTGTATTTTGGCAAGGCACATGTGTTCCTGCTGCAGCTGATCTCAAGAGGAGCCTCATTCACACACGGTCGGGTCCCATTCGGCCCTCGGATAGCCTGCTGGGTTGAAAGTGCACTGGGTGCTGATAGGCTTTCATCTATGGCTCTACCGCAGAGCAATGTTGCTCAGGTGCCGCAGGCCCTGTTTTCACATCACATTCCACTGATGACACGCCGCCAGCGTGAGTAACGGCTCCCACATGGATCTGTCAAAAGACACGCTGCCGAAACCCAGCGGCTACATCCAGACAACCTCTCTCGCTGAGAATCAGGACGCCCATGTTTAATGCATTCACACACTGTCCATATTCTCAGCAGCTCCTTTGATCTTTAAGCAGGGATGAAGAAAGGACTCTTGTTACTCCCAAAAGAGCTTCATGTTGTGTCCAGTGCACTTAGCAGCAAGTTTTAAATCTTAAGTGTGCTAAAACCACAGTCTCTTCTCTTGTCACCATGTATTTGAAAAAATGTAAAGTTTTACTGTCACTTTTGATCAATTTAATGCATCCTTGCCACATAAAAGATTTCTTTCCAAGAATCTTACTGACGCTAAACTTTTGAACAGTAGTGTGCCAAACACTAAAAAAAAAAAATGATGCTACTATACATTATCCTAGAGTCTGAAAACACATTGAAAAATCTGGGATTCAAAATCAGGGATTTTTTCACTATATTAGTCATCTCAAAATCCAGAATTTACACTATACTTTTCAGTACTTAAAAAAAAAAAAAAATTGATTGGACAGTGAAAAAAACATTGCTTTTTGTGTTTCCTTAGAGAAAATAGTATAGGTTTTAGTATAGGTTATTGAAATCCCCCGCTCATCTCTAAATACATGTCTGTAAAAGAGATACATGTCTGTTTATTTCTCCTCTCATATTTGTATGAAATGTGACTGTTTATTGCTAAACATGGCATTGTTCTTGTGTTCGAAACTGGTCTGGGTCTCTGGTAAAACTGGTATCTCAGGTAAGACCTCCTTGTAGAGTTTTTCATATTCTAACATGGCTATGTGTAAGCTTCAGAAATGTCACCCCTGTGCACACTTGGCTACCAAAATCCACAGAAACACATGTGCAATTCATTGTCTCAATCCCAAAAGCATGCAAACACACCATGACATCCCAGACTCAAAGACTCAGACTGGTTTTACGATTCACACATTTTCCAAGCTACTTTGTCTGTGACACTGCAGTGACCCTGGATTCAGCCTATCACTGGAGAAGAATGAGTTTCAGTGTTATTCTTTCTGTAATTGGTGAAAACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_00564614_00567490.mRNA True 1521 mRNA 0.41 2 563530 567576

Neighbor

gene id symbol gene type direction distance location
CI01000069_00516206_00538847 NA coding downstream 23936 516206 ~ 539594 (-)
CI01000069_00486030_00493370 NA coding downstream 70160 485818 ~ 493370 (-)
CI01000069_00411079_00477452 CLEC16A coding downstream 86078 410292 ~ 477452 (-)
CI01000069_00391688_00397509 PIGQ coding downstream 165933 391019 ~ 397597 (-)
CI01000069_00388295_00388899 NA coding downstream 174604 387760 ~ 388926 (-)
CI01000069_00583939_00586883 NA coding upstream 16218 583794 ~ 586883 (-)
CI01000069_00919963_00924163 CUNH16ORF72, C16ORF72, C2H16ORF72, C16ORF72.S, C6H16ORF72, CLG13H16ORF72 coding upstream 352345 919921 ~ 925610 (-)
CI01000069_00952894_00955774 NA coding upstream 384808 952361 ~ 955790 (-)
CI01000069_00983726_00984227 PDE6G coding upstream 415577 983153 ~ 984314 (-)
CI01000069_01023405_01025613 NA coding upstream 455766 1023342 ~ 1026058 (-)
G273562 NA non-coding downstream 80821 482295 ~ 482709 (-)
G273564 NA non-coding downstream 82021 481062 ~ 481509 (-)
G273599 NA non-coding downstream 163858 399466 ~ 399672 (-)
G273591 NA non-coding downstream 216879 346288 ~ 346651 (-)
G273580 NA non-coding downstream 237103 326206 ~ 326427 (-)
G273712 NA non-coding upstream 189792 757368 ~ 757573 (-)
G273726 NA non-coding upstream 206055 773631 ~ 773953 (-)
G273727 NA non-coding upstream 206614 774190 ~ 774466 (-)
G273728 NA non-coding upstream 207755 775331 ~ 775658 (-)
G275173 NA non-coding upstream 348908 916484 ~ 952244 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC other downstream 516316 43906 ~ 52896 (-)
G275178 NA other upstream 359347 926923 ~ 945804 (-)
CI01000069_01645966_01647142 NA other upstream 1078192 1644522 ~ 1647326 (-)
CI01000069_02589498_02621318 SYT3 other upstream 2043599 2589469 ~ 2621641 (-)
CI01000069_02997434_03008924 NA other upstream 2421450 2997275 ~ 3008924 (-)

Expression


Co-expression Network