CI01000069_00910238_00919183


Basic Information

Item Value
gene id CI01000069_00910238_00919183
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 909886 ~ 919703 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_00910238_00919183.mRNA
CTATATGAAACCATGCAATTAAGTACATAGAAGCACAGTGCTTGTGTTGTCCTTGGTGATGAACTGTATTTGACCTCAGGGGAGTAGAAATTGAATATAAACTCAAGGTCAAAACTTTAAGCTTTTATATTTTGCATCAAAGTCTGGCTCAAGAAGAACTGAGAGTTCTTTGACCCACTTTGCTTTTGTTTAAAATACATTTCATTAGTACTGGAATCACCGAGGGAAAACATTGCCTCACTCAAAAAGTGCACTCAAGACACGATTCCTGCATCTTAATAACCTCCAACGTTAATTCAGGGACCTTGTTATCCAACCAAAAATTCAGTTGTGAATATGAAAATTACTCAGCATGGCAATGTCTCTCTCACTGTGTAGTTATCAGAGTGCTCTTTTGAGCCTTCATGCTCTGCTGGTCTTCCTGCGAGTGATGGCCTCTAGTCCATTAATTACCTCACAAATAATTGGTGTTTCCAACACTCTCACTGGAATGCGAAAATGCTTGGATAGTGATCATTATCAAATGAGGAACCACTTGTTCGTTCACATACATAACATGGCAAAAATACAGTTTTGTGAACGTCTCATAAACGTCATGTGCACAGGGCTTGATATATCTGACCTCATTACACGACCGCAGGTCATTGTCACAATCTGGATCTATGAGCTGTGGAATGATCACTCCTACATCACTGCTATAGGACAAGGGATGGCCAATGTAATTCAGTACAGAATGTTATATTTCATTTACACCCGCTCCAATGGAGAGGAGAAGCCTGCTGGTTTTGCAAAGGGCTGCTGTCTCCAGTCACCAGAAACTCCCCTGTGCAAAGACATGGCGTCATACACAGCGTCCCTCAAACACAAACTCATCTTATATCGAGAAATAAAGACAAGGGCAAAAAGAAAATCCATGTTAGATGAAGAGCCCTGCAGAGCCAAAGCAGCACATGCTCTAATCGCCCAGGGGCTCATATCGACATATATTTCTACTTCTAAGGGGGTCAGAATCCAGCTTGACTTCTACACATCAGTACAAAGCAGGACCGTACATGTGCAGCTCTCCAAATCCTCTGGCCTGGATTTGAAAAGCATTTAAAGGACACTTCAATTTCAAGACGACACAGTTTTTCTCTACTTCTCCTGAGAGACACCCATTCTTATAGCACAAAGACTCACCTAACCCCTAAACCAAATCACAACAGCCTTGAAATGTAAAATGTCAACAATTGCACCATTTTATCATAAGCCTTGCTTCCCTTGCATTTCTTTTAATGTCTATATATGGTTCCTAAAAAAAACAAAAAAACAACAGGTCTGGCTGAATGCATTAGTGCAAAATCATTATTGCAACCATCTCAAGTTCACACAAACATTTAGATCAGCAGCAGTTTCAATTATGACCAATAACATTGTACATTTCTAAAATGATCTGCCATTCAATGAGTGCAAAGAAAAACTGAAAATATACTGATGGGAAATGAGCTGATGCTGACATTATTATCTGAAAACAAACATCGAGTTATTAGCTTGGCAATGCTAGGAAGCGCAACTATGAGATACTGTGAACTAAAAACAGCCTATTTTATTTGTTGTATCTTGTAGTTAATATATTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_00910238_00919183.mRNA True 1619 mRNA 0.39 5 909886 919703

Neighbor

gene id symbol gene type direction distance location
CI01000069_00743257_00745220 NA coding upstream 163815 743182 ~ 746071 (+)
CI01000069_00596413_00741443 GRIN2A coding upstream 168443 596413 ~ 741443 (+)
CI01000069_00575065_00578555 EMP2 coding upstream 331243 575065 ~ 578643 (+)
CI01000069_00403871_00404476 SOCS1A coding upstream 505393 403606 ~ 404493 (+)
CI01000069_00357901_00365747 NA coding upstream 543367 357901 ~ 366519 (+)
CI01000069_00925578_00927804 NA coding downstream 5616 925319 ~ 927819 (+)
CI01000069_00932460_00950854 USP7.S, USP7 coding downstream 12607 932310 ~ 951447 (+)
CI01000069_00962392_00964350 NA coding downstream 41109 959810 ~ 964499 (+)
CI01000069_00966300_00979227 CLCN7 coding downstream 46597 966300 ~ 980520 (+)
CI01000069_00994148_01017851 ARHGDIG, GDIR2, ARHGDIB coding downstream 73749 993452 ~ 1018734 (+)
G273459 NA non-coding upstream 148115 761569 ~ 761771 (+)
G273456 NA non-coding upstream 152644 757005 ~ 757242 (+)
G273408 NA non-coding upstream 404766 504865 ~ 505120 (+)
G273407 NA non-coding upstream 405740 503646 ~ 504146 (+)
G273401 NA non-coding upstream 426659 482814 ~ 483227 (+)
G273761 NA non-coding downstream 2745 922448 ~ 924406 (+)
G273770 NA non-coding downstream 103467 1023170 ~ 1023898 (+)
G273827 NA non-coding downstream 165029 1084732 ~ 1084941 (+)
G273850 NA non-coding downstream 199673 1119376 ~ 1120080 (+)
G273359 NA other upstream 430805 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 1113697 2031954 ~ 2040427 (+)
G274270 NA other downstream 1752921 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 1973143 2893418 ~ 2894947 (+)
G274603 NA other downstream 2880320 3800023 ~ 3803501 (+)

Expression


Co-expression Network