CI01000069_00925578_00927804


Basic Information

Item Value
gene id CI01000069_00925578_00927804
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 925319 ~ 927819 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_00925578_00927804.mRNA
GTATATAAACTTTGGAAAATATTTTGTAGGATGGTACAAATTCCTGTGAACAAATAGTTCACTATTGCATTCTGAAATTCAATAAGATATAGGCTATATTAAACATAATACAATGAGGAAAAAGCTGTCAAGTGTCAGATTCAATTCAGCTACTCCACACATTTCCACTCTTTTTGCACTTATGCTGAGCTGACAAGTTCACATATGTATAGCCTAATTTATTTAAAAAAAAAAAAAAAAAAAAAACATTCAAAACAAAATGAATGCAAGAACATTGAAGGGCTCCAGTCATTTGGGATGCAGCTTCAGTGTGCAATTGGGCGTTAGGTGTTCAGCGCTGACAGCAGACAAGGCCGAGGTCGTCTTAGTGCAGGCCCAGCCTCAAAGGCTCGACCTGTTTACCCCACCTCCGCGTCCTCCAACTCCCCACCAGCCTCTGCCCGCGGAACCACCATCAGACCGGCCCGAGGGAGACAAAGAGCCCAGGCATCTTCCCATCCTAACAGCCGCCAACATGAACCACCATCACACGCAGCAGCAGAAAGCCGGCGAGCAGCAGCTCAGCGAGCCCGAGGACATGGAAATGGAGGGTACGTAAAGGCCTCGTGCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_00925578_00927804.mRNA True 613 mRNA 0.46 3 925319 927819

Neighbor

gene id symbol gene type direction distance location
CI01000069_00910238_00919183 NA coding upstream 5616 909886 ~ 919703 (+)
CI01000069_00743257_00745220 NA coding upstream 179248 743182 ~ 746071 (+)
CI01000069_00596413_00741443 GRIN2A coding upstream 183876 596413 ~ 741443 (+)
CI01000069_00575065_00578555 EMP2 coding upstream 346676 575065 ~ 578643 (+)
CI01000069_00403871_00404476 SOCS1A coding upstream 520826 403606 ~ 404493 (+)
CI01000069_00932460_00950854 USP7.S, USP7 coding downstream 4491 932310 ~ 951447 (+)
CI01000069_00962392_00964350 NA coding downstream 32993 959810 ~ 964499 (+)
CI01000069_00966300_00979227 CLCN7 coding downstream 38481 966300 ~ 980520 (+)
CI01000069_00994148_01017851 ARHGDIG, GDIR2, ARHGDIB coding downstream 65633 993452 ~ 1018734 (+)
CI01000069_01020120_01022182 ECI1 coding downstream 92301 1020120 ~ 1022291 (+)
G273761 NA non-coding upstream 913 922448 ~ 924406 (+)
G273459 NA non-coding upstream 163548 761569 ~ 761771 (+)
G273456 NA non-coding upstream 168077 757005 ~ 757242 (+)
G273408 NA non-coding upstream 420199 504865 ~ 505120 (+)
G273407 NA non-coding upstream 421173 503646 ~ 504146 (+)
G273770 NA non-coding downstream 95351 1023170 ~ 1023898 (+)
G273827 NA non-coding downstream 156913 1084732 ~ 1084941 (+)
G273850 NA non-coding downstream 191557 1119376 ~ 1120080 (+)
G273848 NA non-coding downstream 220645 1148464 ~ 1178111 (+)
G273359 NA other upstream 446238 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 1105581 2031954 ~ 2040427 (+)
G274270 NA other downstream 1744805 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 1965027 2893418 ~ 2894947 (+)
G274603 NA other downstream 2872204 3800023 ~ 3803501 (+)

Expression


Co-expression Network