CI01000069_00952894_00955774


Basic Information

Item Value
gene id CI01000069_00952894_00955774
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 952361 ~ 955790 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_00952894_00955774.mRNA
GCGGCAGGGGTGGAGCAGGTGAGCGACTATGAAAAGCTTGTAAACACCATAGAAACTGGTTTCAGTCTAACCATCAGCAACAGCCTCAACAGGACAGTAGATGGTGCCAAGGGCTCCGACGTCAAGGTCTACCATGTGCACACTCCGTTCACCCCACAGGGCACAACTATTAAAGATTCTCAAATCCAAATGGGATCATCCAGACCTGTTCAGTCCCAGTCAACTGAAGCCAAAAACAAATTCATCAGCTATGATTCATACGAGCTGGGTCGTACTCCAGGAATGGCCACCTGCACGCACTGCCAACAGCAGGTCTTAACCAACGTCACCTACAAAGTAGGAGTTTACGCCTGGTTAATGTGCTTACTCTTCATCCTGTGCGGGTTTGTTTTATTCTGCTGTCTGATCCCATTCTTCGTCAAGTTTTTCAAAGACGTCTATCACACATGCCCGAAATGCAATAAGATCCTGCACATTGAAAAGAAACGATGCTGCTAACCCCGCCCCTTCCCCGATTTTAACACTGCTCATGGATTTGTGTTGCACCTTACACTATATGAAGGACACTTTCAGACCAACGCAGATGTCATTTAGTACAAACTTGCCTGTATGAACTAATGCTTTGCAAAGTTTGTAACTAAAAACCTACTGATGTTCATCTGGTTTAGTCTTTTAATTACAAATGAATATGAATACTCATGGTTTTGATTGTATATCTATAAGGGACTCGGGGTTAAGGGTTCACGGAACCAAAAGTTTGATTTGCCTAAGTACAGTTACATCACGTAATGTAAATATCAGCAATTTTGCTGAACTATTTAGAATGGTGGTTCTCAACAAAGGGGCCTCAAAAGGACTTAATGATTTTACCAATACAAGCATTAAAATAAGCTAACGCAACTAAAAAAAAAAAAAAAACTTTAGCAATTTTTCACTTCTGTAAAAAGCCTCTGAATCTTTACAATAATGTCAAATATGTCATATGTGCATCTAAACTGTCATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_00952894_00955774.mRNA False 1008 mRNA 0.41 4 952384 955774

Neighbor

gene id symbol gene type direction distance location
CI01000069_00919963_00924163 CUNH16ORF72, C16ORF72, C2H16ORF72, C16ORF72.S, C6H16ORF72, CLG13H16ORF72 coding downstream 26774 919921 ~ 925610 (-)
CI01000069_00583939_00586883 NA coding downstream 365501 583794 ~ 586883 (-)
CI01000069_00564614_00567490 NA coding downstream 384808 563530 ~ 567576 (-)
CI01000069_00516206_00538847 NA coding downstream 412790 516206 ~ 539594 (-)
CI01000069_00486030_00493370 NA coding downstream 459014 485818 ~ 493370 (-)
CI01000069_00983726_00984227 PDE6G coding upstream 27379 983153 ~ 984314 (-)
CI01000069_01023405_01025613 NA coding upstream 67568 1023342 ~ 1026058 (-)
CI01000069_01052717_01076129 ABAT coding upstream 96434 1052208 ~ 1076129 (-)
CI01000069_01085974_01097576 METTL22 coding upstream 129891 1085650 ~ 1097576 (-)
CI01000069_01141607_01144384 NA coding upstream 185696 1141470 ~ 1144821 (-)
G275173 NA non-coding downstream 140 916484 ~ 952244 (-)
G273728 NA non-coding downstream 176726 775331 ~ 775658 (-)
G273727 NA non-coding downstream 177918 774190 ~ 774466 (-)
G273726 NA non-coding downstream 178431 773631 ~ 773953 (-)
G273712 NA non-coding downstream 194811 757368 ~ 757573 (-)
G275234 NA non-coding upstream 9610 965384 ~ 966878 (-)
G275235 NA non-coding upstream 14844 970618 ~ 971686 (-)
G275175 NA non-coding upstream 44149 999923 ~ 1002774 (-)
G275169 NA non-coding upstream 59064 1014838 ~ 1019446 (-)
G275198 NA non-coding upstream 72199 1027973 ~ 1031978 (-)
G275178 NA other downstream 6580 926923 ~ 945804 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC other downstream 905170 43906 ~ 52896 (-)
CI01000069_01645966_01647142 NA other upstream 689994 1644522 ~ 1647326 (-)
CI01000069_02589498_02621318 SYT3 other upstream 1655401 2589469 ~ 2621641 (-)
CI01000069_02997434_03008924 NA other upstream 2033252 2997275 ~ 3008924 (-)
G275699 NA other upstream 2036730 2992504 ~ 3078168 (-)
CI01000069_03415853_03417644 LIMD2 other upstream 2457199 3412973 ~ 3417644 (-)
CI01000069_00411079_00477452 CLEC16A coding downstream 335783 410292 ~ 477452 (-)
G273558 NA non-coding downstream 233515 519190 ~ 579720 (-)

Expression


Co-expression Network