CI01000069_01099046_01114142 (TMEM114)


Basic Information

Item Value
gene id CI01000069_01099046_01114142
gene name TMEM114
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 1099046 ~ 1114404 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_01099046_01114142.mRNA
ATGAAAGTCACTTTCACAGGTTTGGCCAGTTTTGTGGCCACCTTTGGTGTCCTCAGCTTTGTAGGTCTCGTTCTGGCAATTGGAACCGATTTTTGGTACATCATTGACACTTCTAAGAGAGAAAACAGCTCATCTGTGTCTCTGAGCTCACATTCTGGACTGTGGCGGACTTGTAACTTTCATAACCAGTGCTGGCCATTTATGAATCCTTTTGGAGCAGGAAGAAACTTGTCAGATTCACAAAGGCAGATACTAAACATGCATGGAACATTCATCGTCCTGCTGCCTCTCAGCGTGATTGTGCTATTTGTTGGAGGAATGCTGGGCTTCATCAGTATGTTGGCACGAGCCTACCTGCTGCTCCTCCTGACTGGAGTGCTGCTTCTGTTCAGCGCTGTGCTCTCATTGGCTGGAATCTGCGTCTACATGGCGTACTCTGCGGCCGCCTTCAAAGAGGCTGTGAATATCTCTGGCCACAAAACCCTGGAGGACATAGAGATTTACTTTGGCTGGTCTCTGGTTCTGGCCTCTGTTTCTTTTGTTGGAGAACTCTGTACTGCCGTGGCATTCCTACTTACCTCAGCCAGAGTGAGCCAGCTGACCAATCAGGAAGACGACGAATAATTATCTGATGTGACACGATCTGACAGGACAGGAGAGAGTTGCACCACAAGAAGGCATTGTAAATGACATATAAACACTGAAAATTACATCGATGTTTACATTTTCATATTTTTTAAAAGTCAAATGAAAATTTCAGTACATTTCAACCTTCACTTTTAGTAAGGTCATAATACATGGTTAATCTTTGAGGTTTGTGAACCCCTAGGTTTTTTTTTTTTTTTTTTTTTTTGACATTTGTGATAGAAATGCTAATACTAAATTA

Function

symbol description
tmem114 Predicted to be located in apicolateral plasma membrane. Predicted to be integral component of membrane. Predicted to be active in apical plasma membrane.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_01099046_01114142.mRNA True 886 mRNA 0.43 4 1099046 1114404

Neighbor

gene id symbol gene type direction distance location
CI01000069_01047561_01050241 NA coding upstream 48706 1047495 ~ 1050340 (+)
CI01000069_01027083_01031960 NAT15, NAA60 coding upstream 66265 1027083 ~ 1032781 (+)
CI01000069_01020120_01022182 ECI1 coding upstream 76755 1020120 ~ 1022291 (+)
CI01000069_00994148_01017851 ARHGDIG, GDIR2, ARHGDIB coding upstream 80312 993452 ~ 1018734 (+)
CI01000069_00966300_00979227 CLCN7 coding upstream 118526 966300 ~ 980520 (+)
CI01000069_01340581_01345512 NA coding downstream 225764 1340168 ~ 1345955 (+)
CI01000069_01454390_01514188 SEPT12 coding downstream 339986 1454390 ~ 1514188 (+)
CI01000069_01634504_01643721 FLR, TTC30A, TTC30A.S coding downstream 519780 1634184 ~ 1644078 (+)
CI01000069_01649266_01653494 ALG1 coding downstream 534862 1649266 ~ 1653697 (+)
CI01000069_01661474_01662461 NA coding downstream 547070 1661474 ~ 1662831 (+)
G273827 NA non-coding upstream 14105 1084732 ~ 1084941 (+)
G273770 NA non-coding upstream 75148 1023170 ~ 1023898 (+)
CI01000069_00962392_00964350 NA non-coding upstream 138084 959810 ~ 964499 (+)
G273761 NA non-coding upstream 174640 922448 ~ 924406 (+)
G273459 NA non-coding upstream 337275 761569 ~ 761771 (+)
G273850 NA non-coding downstream 4972 1119376 ~ 1120080 (+)
G273848 NA non-coding downstream 34060 1148464 ~ 1178111 (+)
G273955 NA non-coding downstream 231973 1346377 ~ 1346723 (+)
G274005 NA non-coding downstream 299600 1414004 ~ 1414380 (+)
G273766 NA non-coding downstream 403254 1517658 ~ 1541835 (+)
G273359 NA other upstream 619965 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 918996 2031954 ~ 2040427 (+)
G274270 NA other downstream 1558220 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 1778442 2893418 ~ 2894947 (+)
G274603 NA other downstream 2685619 3800023 ~ 3803501 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025400 TMEM114 coding NC_007114.7 CM002887.2 27929505 ~ 27952302 (+)