CI01000069_01340581_01345512


Basic Information

Item Value
gene id CI01000069_01340581_01345512
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 1340168 ~ 1345955 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_01340581_01345512.mRNA
CTATAAAATGTAAAAGTCTCACTGTAACATACAAAGTCACATTGAGAGATATTAAGTCACGATTTTTTTACTCTAAGATGGAAATATCATCAGTCAGTCCTTTTAATGGAAAGGACAGACAAAGATGAAACGGGAAATGATAGAGAGAAGTGGAGGGATGTGATCTGAAAATGACCCGAGCTGGATTCAAACTCAGGTCGCCCACAGAAAAGCGCTAGTGTAACAAATAAAAGAGCACATGCACTACCCGCCCAGCCACATCTCCTACTGAGAGACACTTCTGAGTTCACCTCAGAAAGTAACCACAGCCAACAAACACAAAACTTTTTGAGGAATTTTAAGGCACACAGACTGACAGTCTGTCAAAAAAACAGCTCTCAGGCAATACATGTGGCAGTGCTGTATATACAATAATGGCCGCCGGGTTAGACTTTGGCTTGGCTCATTTTGGAATATCTCCGGCTCCTCAGACCGAAGAAATTGAAACTAGCAGTACAGGTGGCCAACATCTATTATGTAGAGAGATGCAGATGGAGACGCACAAAAGAGGAAAGGATGTTTCAGTTCAGCTAACCCTTCCACGGTTTGCTGTACACAGACAGGCTCGCTCGGGAACGACACAATATCAAGAGACCTCTGGGTGCTGTGATTGGTCAAGTAATTTGTCCATCATGATGAGTCATCTCGTAGAACATCCGATCATTAACAGGTTCAGGATAAAAGACGCCGTGGAGAACGGAAGAGGAGGGAGCTTGGAGTGTTTGTTGGCTGTGCCATTTGTTTAATGCTGCTGTTTAGTGGTGGTTCGCTTGCTTGCTTGATTGATTGTTTGTGGTGTTTGATACAGAGAACGTCTTATCTGAACTAAACTTCATCAGCCCGAAGATAAAGAAAAGGAAAGTATGTCACGTGACTTACATCTTACAAACATGCAGGATTGACTCTGTTTAGACACACTAGGGAAGGAGCGTGTGCAACCTTGTGTAAGTTTTGTTCTGATAGATAGTGAAGCTCTTTATTTTCTGGTTTTGTTTTCAGTTAGTTTAGAGGGCGGATAATTAGTTAGTGAATGTTTTGGTTTTGTTCTTTTCGTTTGTTTAGCGCCGCTCATTTTCTTTTTCTCTGTGGCTTGTTTCAATTTATTACAATTTCTTTTCTTTGTATATAGCTGTAAATAGGGGTTTTTGGTTGGTGTTTCCATTTGTGTACATTTATATTCTTTTTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_01340581_01345512.mRNA True 1228 mRNA 0.41 3 1340168 1345955

Neighbor

gene id symbol gene type direction distance location
CI01000069_01099046_01114142 TMEM114 coding upstream 225764 1099046 ~ 1114404 (+)
CI01000069_01047561_01050241 NA coding upstream 289828 1047495 ~ 1050340 (+)
CI01000069_01027083_01031960 NAT15, NAA60 coding upstream 307387 1027083 ~ 1032781 (+)
CI01000069_01020120_01022182 ECI1 coding upstream 317877 1020120 ~ 1022291 (+)
CI01000069_00994148_01017851 ARHGDIG, GDIR2, ARHGDIB coding upstream 321434 993452 ~ 1018734 (+)
CI01000069_01454390_01514188 SEPT12 coding downstream 108435 1454390 ~ 1514188 (+)
CI01000069_01634504_01643721 FLR, TTC30A, TTC30A.S coding downstream 288229 1634184 ~ 1644078 (+)
CI01000069_01649266_01653494 ALG1 coding downstream 303311 1649266 ~ 1653697 (+)
CI01000069_01661474_01662461 NA coding downstream 315519 1661474 ~ 1662831 (+)
CI01000069_01742287_01864795 CACNA1I coding downstream 396332 1742287 ~ 1864795 (+)
G273848 NA non-coding upstream 162057 1148464 ~ 1178111 (+)
G273850 NA non-coding upstream 220088 1119376 ~ 1120080 (+)
G273827 NA non-coding upstream 255227 1084732 ~ 1084941 (+)
G273770 NA non-coding upstream 316270 1023170 ~ 1023898 (+)
CI01000069_00962392_00964350 NA non-coding upstream 379206 959810 ~ 964499 (+)
G273955 NA non-coding downstream 422 1346377 ~ 1346723 (+)
G274005 NA non-coding downstream 68049 1414004 ~ 1414380 (+)
G273766 NA non-coding downstream 171703 1517658 ~ 1541835 (+)
G274039 NA non-coding downstream 206823 1552778 ~ 1553108 (+)
G274041 NA non-coding downstream 214659 1560614 ~ 1560980 (+)
G273359 NA other upstream 861087 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 687445 2031954 ~ 2040427 (+)
G274270 NA other downstream 1326669 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 1546891 2893418 ~ 2894947 (+)
G274603 NA other downstream 2454068 3800023 ~ 3803501 (+)

Expression


Co-expression Network