CI01000069_01410825_01412802


Basic Information

Item Value
gene id CI01000069_01410825_01412802
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 1410587 ~ 1413155 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_01410825_01412802.mRNA
AGAACAGAACTTTAAGCCCGAATGCATAGCTCAGCATTTGCCACTTAACTAGATCGACTTGTGGTGCAGAAAAGCTGTAGGATTCCGTGCATCACTTTCGAGTTGTTTACACTAAACCCCTGAGCCAAAGTCAGGCTCAATGGTGTGAACTTGTGAAGGATCACAAGGATGACTGGCACAGGCGCGTGGAGTGACAGATGCAGTCATTTACATGGCACCACGTGGATACGGTCCACTGACTATCACTCGCGCGCTCTCCGTTGCCCGTTCTGCCTCTCTCCGCGCGCAATCGGTTTACCTCCACTGAGAAAACAGGAGGCACTTTTCCTTTGCGTTTTCGCTGCCCGACCACAATGAAATCTTGGCAGCTAATTGCAGTCGTGGGAGATGCCCTTCAGGTAAGACACATGAGAGAGGAATATTATGCACAGAAAACAACAGCTGAGCCCGTAGATGGTCCTACACAATGCCGATGTTTTTCTTTTTACAACAAATGGAGACTGAATCACTATGGCTATGACACAGTGCCAACAAATGGAAGAAAATGTGCCAAGATCCATGGCACAACAATATGTCAAAACGCTCTGTATGGTTTCTCCATGCCTCAGATGATTTATGGTGTTATTTTCCACACCAAATGAATTTGGCATTAATAGATGAACTTTTAAACGCTTTCCTGAAAAACTCTGAAGCTAACACTCTCAATGTTTTGAACGGGGGGAAAAAAAGGTTCTGATTGGCAGCATTCATTTTTTTTTTTTTTTTTCAATTTATTTTCTACATTTATATCACAAAGTAATAACTGTATGTCTGCTGCACAGCATATAGAAACATATAGCTTTGTGACATTCTGGCGAAGGAATTTGGTTACTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_01410825_01412802.mRNA True 879 mRNA 0.43 2 1410587 1413155

Neighbor

gene id symbol gene type direction distance location
CI01000069_01155772_01178120 RBFOX1 coding downstream 232467 1155442 ~ 1178120 (-)
CI01000069_01141607_01144384 NA coding downstream 265766 1141470 ~ 1144821 (-)
CI01000069_01085974_01097576 METTL22 coding downstream 313011 1085650 ~ 1097576 (-)
CI01000069_01052717_01076129 ABAT coding downstream 334458 1052208 ~ 1076129 (-)
CI01000069_01023405_01025613 NA coding downstream 384529 1023342 ~ 1026058 (-)
CI01000069_01519314_01531186 FBXL16 coding upstream 106046 1519201 ~ 1531586 (-)
CI01000069_01571371_01593400 GSG1L coding upstream 158216 1571371 ~ 1593400 (-)
CI01000069_01632361_01633951 NA coding upstream 219069 1632224 ~ 1633951 (-)
CI01000069_01645966_01647142 NA coding upstream 231367 1644522 ~ 1647326 (-)
CI01000069_01653730_01654507 EEF2KMT coding upstream 240551 1653706 ~ 1654507 (-)
G275195 NA non-coding downstream 15404 1391823 ~ 1395183 (-)
G275188 NA non-coding downstream 29433 1371056 ~ 1381154 (-)
G275189 NA non-coding downstream 61363 1343436 ~ 1349224 (-)
G275182 NA non-coding downstream 103706 1273440 ~ 1306881 (-)
G275191 NA non-coding downstream 111458 1283491 ~ 1299129 (-)
G275276 NA non-coding upstream 7256 1420411 ~ 1420848 (-)
G275284 NA non-coding upstream 37255 1450410 ~ 1450722 (-)
G275286 NA non-coding upstream 39971 1453126 ~ 1453361 (-)
G275187 NA non-coding upstream 41298 1454453 ~ 1455732 (-)
G275288 NA non-coding upstream 46629 1459784 ~ 1460061 (-)
CI01000069_00952894_00955774 NA other downstream 454797 952361 ~ 955790 (-)
G275178 NA other downstream 464783 926923 ~ 945804 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC other downstream 1363373 43906 ~ 52896 (-)
CI01000069_02589498_02621318 SYT3 other upstream 1198020 2589469 ~ 2621641 (-)
CI01000069_02997434_03008924 NA other upstream 1575871 2997275 ~ 3008924 (-)
G275699 NA other upstream 1579349 2992504 ~ 3078168 (-)
CI01000069_03415853_03417644 LIMD2 other upstream 1999818 3412973 ~ 3417644 (-)

Expression


Co-expression Network