CI01000069_01661474_01662461


Basic Information

Item Value
gene id CI01000069_01661474_01662461
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 1661474 ~ 1662831 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_01661474_01662461.mRNA
GGTGTGATTGTGCAGAATATGTCCTTCAAGGTGGGACAGACTTTGACTGTTAATGGAGTCCCCATGGCCGATTCTACAAATTTTGCCATTAACATTGGTCACAGCGCTGAGGACATCGCTCTACACTTGAACCCTCGTTTTGACGCCCATGGTGACCACCACACTATAATAAAAATCACATTCACCAATGAGGATTTCCTGGTGACTCTTCCTGATGGTTCTCAATTTCACTTCCCTAACCGTCAAGGTGCTGAGAAGTACAAGTATATGCACTTCGATGGCGAGGCCAAGATCTATGGAATTGAAATCAAGTAAAATTAAAAGAAGGCTCACTGTTGTATTCTGAATGCTGAATGATTCTTTGCCTTATTTTGTCACTTATCCAGCTCTGTTCTTCCACAGTTTTCACTTACTCAATATGGAGTATCTCAATCACAATCTTATCATTTGTATTCTAAATCAGCATTATAATTTTGCTGTGGCACTGCCTATCTAAACCACTAGAGGGAGCGCAACTACAAAAAATTGCCATGAGCTTTAGCGGTAGGCCTATCACAGGTAGTTGACATTTTCCAACTAGATTATTTTTCCTACTACTTTTCTATAATACAGCATCATATTCTTAAATCTGGTTTATAACTAAAGCAAATTCACAATCTATAGCTGTTGGCAGATATAAATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_01661474_01662461.mRNA True 685 mRNA 0.39 3 1661474 1662831

Neighbor

gene id symbol gene type direction distance location
CI01000069_01649266_01653494 ALG1 coding upstream 7777 1649266 ~ 1653697 (+)
CI01000069_01634504_01643721 FLR, TTC30A, TTC30A.S coding upstream 17396 1634184 ~ 1644078 (+)
CI01000069_01454390_01514188 SEPT12 coding upstream 147286 1454390 ~ 1514188 (+)
CI01000069_01340581_01345512 NA coding upstream 315519 1340168 ~ 1345955 (+)
CI01000069_01099046_01114142 TMEM114 coding upstream 547070 1099046 ~ 1114404 (+)
CI01000069_01742287_01864795 CACNA1I coding downstream 79456 1742287 ~ 1864795 (+)
CI01000069_01916183_01920282 NA coding downstream 253352 1916183 ~ 1920352 (+)
CI01000069_01945534_01950027 GRAP2A coding downstream 282703 1945534 ~ 1950622 (+)
CI01000069_01951110_01962486 FAM83FA coding downstream 288279 1951110 ~ 1963053 (+)
CI01000069_01974435_01988436 RAC2 coding downstream 310760 1973591 ~ 1988719 (+)
G273769 NA non-coding upstream 79084 1570204 ~ 1582390 (+)
G274041 NA non-coding upstream 100494 1560614 ~ 1560980 (+)
G274039 NA non-coding upstream 108366 1552778 ~ 1553108 (+)
G273766 NA non-coding upstream 119639 1517658 ~ 1541835 (+)
G274005 NA non-coding upstream 247094 1414004 ~ 1414380 (+)
G273774 NA non-coding downstream 43864 1706695 ~ 1728531 (+)
G273768 NA non-coding downstream 81522 1744353 ~ 1766411 (+)
G273765 NA non-coding downstream 247119 1909950 ~ 1911444 (+)
G274088 NA non-coding downstream 259304 1922135 ~ 1922496 (+)
G274103 NA non-coding downstream 329306 1992137 ~ 1993190 (+)
G273359 NA other upstream 1182393 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 370569 2031954 ~ 2040427 (+)
G274270 NA other downstream 1009793 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 1230015 2893418 ~ 2894947 (+)
G274603 NA other downstream 2137192 3800023 ~ 3803501 (+)

Expression


Co-expression Network