CI01000069_02991356_02994073


Basic Information

Item Value
gene id CI01000069_02991356_02994073
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2990112 ~ 2994319 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_02991356_02994073.mRNA
ATATATATGCACCTTCTTGGCATGGCATTATTGCCTAAGATGTGAAAACATGTTCACTGTTGTGCAGACTTTAATGCATTTATACAGTGATACAGACCTCTACGAAAGCCTTGAGAGGCCATTAATTATTACTTCTGTCTTTTGTTGGGAGTCTTTTGACTTAATTTTGAAACAACGAAAGAGTGTTTTCTCATGTTGTTGTTCAAAAGTCGGTAAGAATTTTTAATATATTTTATAGTATCTTAGTTATCTTATGCTCACTAAGGCTGCATTTATTTGATCAAAAATACAGTAATATTATTACAATTATATATTTTAAAATGTAATTTATTCCTGTGATGTAAAAGCTGAATTTTAAAAAGCATCATTACACCAGTCTTCAGTGTCACACGATCCTTCAGAAATCATTCTAATATGATGATTTGCTGCTCAAGAAAACATTTATTATTATTATCAATGTTGAAACTCACTGCTTGATATTTTTTGTGGAAACCGAGAGGCATTATTTTAGGATTCTTTGATGACTAGAATGTTCAAAAGAACAGCATTTATATGAAATAGAAATCTTTTGTAACATTATAAATGTCTTTTGATGAATTTAATACATCCTTGCTGAATAAACATTCATTTCTTAAAAAAAAAAAAAAAAAAAAATCTTCCTAACCCCAAACTTTTGAAAGGAAGTGTATGGATATAGAATTATCTTTAAGAGAAGACATGAGAAATATGAGAAGTGAGCAACATACAGAAAAATGAAAGTAAATAAACCTTTGGTATATTCAGATCATGAAAAAATTCAGTCAAGATTAAGAAAAACAAGAAAAAAATAAATAAATAAATTAAAGCATGGCCTCTTAAGGTTTCTGTAGACCTCAGCTGTCATAAGTGCAAACATTTACTAAACACACACTCACAAACACTTAAACACAATCAAAGGTCAAAATGTGCACGGAGAACAGTGATATGGATCACAAAACACAAGCTTTGGTGTAAAATCGGATTTGAAACATTCAAACTGTGAAATTAAAGCTACTTCAAAAACTGCAATCATATTGAAGTCTGAAAAAAAGAAACAATATGATTATTAAGACACTGCAGACCATACCAATGGTTAGGTGTGGTTTAAACTGCCTGAGCCTCATAACCGCTCTTCCTCTGGACACCTGAGCAGCCTGAATGCAGCTGAGGATCAGATGATGATGAGATTATTGTGTAAGATAGTATCAATGTGATAAAAAGAAAACATGGACAGCAGGCTTCTGCTCATCATCATGAACGGAAAAACTCTCCGAGGTCTTTTCTACGATCTACGTCTCCCCATTATATTAATGGAAGCGCAAACAATATTGTCACAAAGCCCAGAGGTAGCAGTCAATGATGCAGCCGCACTCCAGACAAGGATCTCACAGCATCACGACTCCAGCTGCAGACCAGAGCTGGTGAAACGCCGTCTCCAAGCAACATCAGCTCTTGAGAAGAGCTTTATCCAACTGAACGCCAAGGACTCCTTCACCTTGGTGTGGCTCAAGTATACAGCTAAAGCTCTCATTACAGCCTACAGGAGCAAACACAATATGTATCTCGGCTACTCCTTATCCTCAACACTATTTGAATTCAACGTTTGGGATGAGGTACAGATCGTTCCTGCTGGCTCAGAATGGGAAATACTAAGGCTGAGGAGACGAAGGCATCAAGTGTTATCTTATAATGAATGATTATCTCTTACTCCACACAATTGTGCACAATAATGCACAATTGTGTATCAATTGAAGCATATTTGAAAAGTAAAGAGGGAAATCTTCAGCTCAAAACATCACATTTACTGCAGTAAACCAATATACAACAATTATGCTGAGATGCTGACATGAACACTATCATTTACCCCACTATCATGTGAGTTTGGAGACTGGAATTTAAGTGTCATTATTATAATTAAGCATTATCATTGATTGAGCATGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_02991356_02994073.mRNA True 1961 mRNA 0.35 3 2990112 2994319

Neighbor

gene id symbol gene type direction distance location
CI01000069_02982693_02987269 CLEC19A coding upstream 2585 2982563 ~ 2987527 (+)
CI01000069_02927711_02933564 NA coding upstream 56533 2927437 ~ 2933579 (+)
CI01000069_02903983_02905418 NA coding upstream 84458 2903983 ~ 2905654 (+)
CI01000069_02894136_02894807 COX6A2 coding upstream 95165 2893418 ~ 2894947 (+)
CI01000069_02862381_02864927 PRF1.1 coding upstream 125119 2861654 ~ 2864993 (+)
CI01000069_03105942_03125404 C1QL1 coding downstream 111623 3105942 ~ 3125613 (+)
CI01000069_03140325_03168014 NA coding downstream 145540 3139859 ~ 3168082 (+)
CI01000069_03237106_03239286 CCDC43 coding downstream 242543 3236862 ~ 3240591 (+)
CI01000069_03250683_03252335 FZD2.S, FZD2 coding downstream 256364 3250683 ~ 3252785 (+)
CI01000069_03273461_03285388 MYLK5 coding downstream 279142 3273461 ~ 3286343 (+)
G274414 NA non-coding upstream 100139 2889763 ~ 2889973 (+)
G274412 NA non-coding upstream 107542 2879639 ~ 2882570 (+)
G274356 NA non-coding upstream 134515 2853420 ~ 2855597 (+)
G274403 NA non-coding upstream 144943 2844730 ~ 2845169 (+)
G274399 NA non-coding upstream 150070 2834707 ~ 2840042 (+)
G274433 NA non-coding downstream 11930 3006249 ~ 3008232 (+)
G274355 NA non-coding downstream 87176 3081495 ~ 3081791 (+)
G274467 NA non-coding downstream 106456 3100775 ~ 3101359 (+)
G274468 NA non-coding downstream 108980 3103299 ~ 3104275 (+)
G274495 NA non-coding downstream 168607 3162926 ~ 3163201 (+)
G274270 NA other upstream 308954 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 817919 2031954 ~ 2040427 (+)
G273359 NA other upstream 2511031 477727 ~ 479081 (+)
G274603 NA other downstream 805704 3800023 ~ 3803501 (+)
G274619 NA other downstream 1134809 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1560990 4555269 ~ 4558480 (+)
G274953 NA other downstream 1930148 4924467 ~ 4926687 (+)

Expression


Co-expression Network