CI01000069_02997434_03008924


Basic Information

Item Value
gene id CI01000069_02997434_03008924
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2997275 ~ 3008924 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_02997434_03008924.mRNA
ACCCCTGGTATGGGAATAGCACCTGCTGGAACTGGCCATGTGGACCAGTGGGGACAGTGTCCCATCCTTCCCATCTCAGTGACCCTAATGCGTCATCTCTGCCTGAGCCAGCGGCAGCAAGGTGCGGGCTGGTAGGGACAGGAGTTCGTATCACTGTTGCCATGGTTACAGCCACAGCTAATTGCTTAGACAACATTGGGCCGCTGATGAGGAGCAAGAGAGCTGGACTGAGGTCAGTTAGTTTCTGTTTACTGGAGAGTCTCTTTGTGTCTCTGTGCGGTCTTGGTCTCAGGGTCTTCTGTCCAGACTGTCTGACTTCCTGTTGTGTCGCTGGTCGTGCCGCTCCTGTTGGCAGTGGTGCTGGGAGTGCAGCTGCTGTCAGTCCACTGACGAGGAGTGAGGTTGATCTAGTGAAGGGAGGACATTGGTGGAAGGCCTTGGTGCCCAGTTCTCAGAATGAGGTTGAGCTTGGTGAGCTTCTTCTGTCCTTAAACTACCTGCCCAGTGCTGGCAGGTTAAATGTGGACATCATCCGAGCAAAGCAGCTGCTTCAGACAGACATGTGCCAAGGTTCAGATCCTTTTGTGAAGGTGCAGCTGGTGACAGGTCTTAAGTTGATGAAGACTAAGAAAACGTCCTGTATGAGGGGCACCATTGACCCCTGCTACAACGAGTCCTTTAGCTTCCGTGTACCTCAAGAGGACCTGTGTGAAGTCAGTCTTGTGTTCACAGGTATTGTTTTGAATATGAACGTGTACACATGAAAATACGCACACAAAAACATACATACAGAACTCTACACAATGAAATATGTGTGCAGTCTTTTTGATGACCTTTCGAGAAAATACAAATTTTCAATACAAATACAATTTACCTTTTCATGTATATTAGGTTCATGTGCTAGGAAAAATTGATCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_02997434_03008924.mRNA False 923 mRNA 0.48 5 2997275 3008924

Neighbor

gene id symbol gene type direction distance location
CI01000069_02944962_02977798 SMG1 coding downstream 19477 2944833 ~ 2977798 (-)
CI01000069_02934862_02943383 ARL6IP1 coding downstream 53892 2934092 ~ 2943383 (-)
CI01000069_02911501_02921826 TCEB2, ELOB, TCEB2.L coding downstream 74588 2911481 ~ 2922687 (-)
CI01000069_02906527_02909006 NA coding downstream 88269 2906049 ~ 2909006 (-)
CI01000069_02895817_02903000 NA coding downstream 94275 2895690 ~ 2903000 (-)
CI01000069_03014089_03015762 ITPRIPL2 coding upstream 3772 3012696 ~ 3016506 (-)
CI01000069_03027056_03028752 APNL coding upstream 18001 3026925 ~ 3028752 (-)
CI01000069_03032171_03032924 NA coding upstream 23066 3031990 ~ 3032924 (-)
CI01000069_03242808_03248880 NA coding upstream 232895 3241819 ~ 3248880 (-)
CI01000069_03298533_03302831 CCDC47 coding upstream 289273 3298197 ~ 3302831 (-)
G275658 NA non-coding downstream 102309 2892738 ~ 2894966 (-)
G275681 NA non-coding downstream 227963 2768956 ~ 2769312 (-)
G275672 NA non-coding downstream 356741 2640335 ~ 2640534 (-)
G275671 NA non-coding downstream 357237 2639787 ~ 2640038 (-)
G275670 NA non-coding downstream 357526 2639512 ~ 2639749 (-)
G275843 NA non-coding upstream 210885 3219809 ~ 3220041 (-)
G275856 NA non-coding upstream 252372 3261296 ~ 3261504 (-)
G275814 NA non-coding upstream 271988 3280912 ~ 3284191 (-)
G275772 NA non-coding upstream 297565 3306489 ~ 3312896 (-)
G275876 NA non-coding upstream 348297 3357221 ~ 3357421 (-)
CI01000069_02589498_02621318 SYT3 other downstream 366959 2589469 ~ 2621641 (-)
CI01000069_01645966_01647142 NA other downstream 1349949 1644522 ~ 1647326 (-)
CI01000069_00952894_00955774 NA other downstream 2041485 952361 ~ 955790 (-)
G275178 NA other downstream 2051471 926923 ~ 945804 (-)
CI01000069_00041648_00043198 EHD3 other downstream 2953903 41648 ~ 43441 (-)
CI01000069_03415853_03417644 LIMD2 other upstream 404049 3412973 ~ 3417644 (-)
CI01000069_03768812_03787588 BRSK1 other upstream 756749 3765673 ~ 3787588 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other upstream 795692 3804616 ~ 3807180 (-)
CI01000069_04932463_04940554 NA other upstream 1930597 4932144 ~ 4941471 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC other downstream 2941812 43906 ~ 52896 (-)

Expression


Co-expression Network