CI01000069_03292108_03292508


Basic Information

Item Value
gene id CI01000069_03292108_03292508
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3292108 ~ 3292784 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_03292108_03292508.mRNA
CTCCTACTGAGAGATTTAAAGCAGCCTGGGAGGAAGACCTGGGAGTTGAACTCTCTGACGATATGTGGGATAAGTGTCAGGCTATGATACAGGTCTGCTCAGTAAACAGCAGACACCAACTGATCCAATTCAAGGTTGTTCACCGCTTGCATTACACTAAAACCAAACTGCATAAAATTTTCCCCTCTGTTTCTCCAATGTGTGACCGGTGCAAGGTGGCAGAGGATACAACTTCTCATGCTTTCTGGTTTTGCCCTTTATTGTCTGGATTTTGGTCAAGTATATTTGACTGGTACTCCAAGGCTTACAATAGGCCTCTTCCGCCGGATGCAGAACTTGCTATCTTTGTTTTTTTTCACAGCACACCTCCTGCCTCCCGGGGACAATACAGCAATCTCTAACCCTGGGTATGATTGTGGCTAAGAGACTTGTGCTGAAGGACTGGAAGTCACCCTCACCCCCTTCCTTTCGAATTTGGATTACGGATATGATCTCTCTTATACAAATGGAAAGACTCAGATTCTTGAGAACTAATTCCATTGAAAAATTTTCCGCTGTTTGGGGTTTATTCCTGGGCCAGTTGGACAAGTTAACCGCTCAACCAGCCCCTAGTGGCTCCTCTGAGGCTAAAGCTGTACATCTTCCTGGGCACCTTGACTGATTGTTTAGCAGGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_03292108_03292508.mRNA True 677 mRNA 0.46 1 3292108 3292784

Neighbor

gene id symbol gene type direction distance location
CI01000069_03273461_03285388 MYLK5 coding upstream 5765 3273461 ~ 3286343 (+)
CI01000069_03250683_03252335 FZD2.S, FZD2 coding upstream 39323 3250683 ~ 3252785 (+)
CI01000069_03237106_03239286 CCDC43 coding upstream 51517 3236862 ~ 3240591 (+)
CI01000069_03140325_03168014 NA coding upstream 124026 3139859 ~ 3168082 (+)
CI01000069_03105942_03125404 C1QL1 coding upstream 166495 3105942 ~ 3125613 (+)
CI01000069_03293097_03294020 NA coding downstream 246 3293030 ~ 3294140 (+)
CI01000069_03306832_03309710 BRAFLDRAFT_264459, MGC82392, GDF8, DCAF7 coding downstream 13633 3306417 ~ 3309710 (+)
CI01000069_03375220_03376645 LY6E coding downstream 82346 3375008 ~ 3376807 (+)
CI01000069_03465840_03471086 STRADA coding downstream 173056 3465840 ~ 3471867 (+)
CI01000069_03479877_03487573 SNRNP70 coding downstream 187093 3479877 ~ 3487771 (+)
G274537 NA non-coding upstream 26798 3265087 ~ 3265310 (+)
G274536 NA non-coding upstream 28282 3263599 ~ 3263826 (+)
G274526 NA non-coding upstream 76286 3215623 ~ 3215822 (+)
G274524 NA non-coding upstream 92301 3199484 ~ 3199807 (+)
G274507 NA non-coding upstream 110366 3181506 ~ 3181742 (+)
G274509 NA non-coding downstream 4553 3297337 ~ 3299001 (+)
G274512 NA non-coding downstream 6627 3299411 ~ 3302842 (+)
G274545 NA non-coding downstream 33230 3326014 ~ 3331130 (+)
G274577 NA non-coding downstream 64286 3357070 ~ 3357285 (+)
G274579 NA non-coding downstream 65895 3358679 ~ 3358909 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 397220 2893418 ~ 2894947 (+)
G274270 NA other upstream 610950 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1119915 2031954 ~ 2040427 (+)
G273359 NA other upstream 2813027 477727 ~ 479081 (+)
G274603 NA other downstream 507239 3800023 ~ 3803501 (+)
G274619 NA other downstream 836344 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1262525 4555269 ~ 4558480 (+)
G274953 NA other downstream 1631683 4924467 ~ 4926687 (+)

Expression


Co-expression Network