CI01000069_03293097_03294020


Basic Information

Item Value
gene id CI01000069_03293097_03294020
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3293030 ~ 3294140 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_03293097_03294020.mRNA
CTATAAAAATCTGCCCCCCATCAAGGAACACCAGACTTTCCTTCTCTCACGCTGACAGAGAATAGAGATGTGGACAACAAACACTTCATCTTCCCAGAGTGTAGACGGGAATTTCTCCAACATTTCATCCCACGACCAGCTCTGCATAGGATCGTACAGCACAATCTTTGATATCCTAATGCTTGTTGTCAATCTTCCAATAGCCCTCTATGTGGTAGTGGAACTATTTCTGAAACAATGTGCAACACCTTCAAGTCCAGGAAACTCGCCTTCCTCTTCCCAGAACGAACTCCTCTTTCTTCATCTAGCCTGCTCTCATTTCTTCTATTACATCCGAGTTCTGCTGAACATCATCCAGAACCTGGGTGGAGTGACTGGAATCGGACAGGAATACATCACAGCCTTCCACAGCTGCAGTTTGATTGGAGGATCTTTATTCTTTGCTGGCATGTCTATAGACTTGTATTTAGCTGTGGCTCATCCTGTAGCGTATGTGAATCAAAAAGCTTCAACAAAGCAAATACATGCGCATATATTCTGCACATTTGTTTGGATGTACACTGTCACCACAGGAATAGTCACGGTCATTTTTAATATCACAATGTACCATCCGTTGACTATGGCTTCTTTTTGTGCAGCAGTCCCTGTGAGTTTCATCTTCTGTGTGGTTGTACTGTTTATCTTACACCCCGCTGGATCAAGGAAAGGCAGTCAGACATCAAGACCTGACAAAATCAAACAGACCGCTATTCGGTTCATTTTGAACAGCTTGATTATATTATCAATTTACTTTCTGCCCCACATCTGCGTATTGATCTATTTATCAGTAAAGAAGGCTGACTGGCTACATCTGCCATGTCAAGTTCTACCTCTGATGCTAACAGTCCAGATTTCAGAGTTTGTGACGCCTCTGATCTTCTTTCATAACACAGGAAAACTGGGTGTAATAGCTAAACATTGTTTAAAAATATGTCGCAATATTGGCAGTTGAAGCAGAACTGTAAAAGTTGGATCCACTTTCTGTGAGTCGTAACTCTTGTATCCCTCCATCCACAGTAACAGACAAAGAAGAAAATGTGTAGATTTATATCAAATGTAACTTGATGAATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_03293097_03294020.mRNA True 1111 mRNA 0.41 1 3293030 3294140

Neighbor

gene id symbol gene type direction distance location
CI01000069_03292108_03292508 NA coding upstream 246 3292108 ~ 3292784 (+)
CI01000069_03273461_03285388 MYLK5 coding upstream 6687 3273461 ~ 3286343 (+)
CI01000069_03250683_03252335 FZD2.S, FZD2 coding upstream 40245 3250683 ~ 3252785 (+)
CI01000069_03237106_03239286 CCDC43 coding upstream 52439 3236862 ~ 3240591 (+)
CI01000069_03140325_03168014 NA coding upstream 124948 3139859 ~ 3168082 (+)
CI01000069_03306832_03309710 BRAFLDRAFT_264459, MGC82392, GDF8, DCAF7 coding downstream 12277 3306417 ~ 3309710 (+)
CI01000069_03375220_03376645 LY6E coding downstream 80990 3375008 ~ 3376807 (+)
CI01000069_03465840_03471086 STRADA coding downstream 171700 3465840 ~ 3471867 (+)
CI01000069_03479877_03487573 SNRNP70 coding downstream 185737 3479877 ~ 3487771 (+)
CI01000069_03488885_03492635 LIN7B coding downstream 194745 3488885 ~ 3492746 (+)
G274537 NA non-coding upstream 27720 3265087 ~ 3265310 (+)
G274536 NA non-coding upstream 29204 3263599 ~ 3263826 (+)
G274526 NA non-coding upstream 77208 3215623 ~ 3215822 (+)
G274524 NA non-coding upstream 93223 3199484 ~ 3199807 (+)
G274507 NA non-coding upstream 111288 3181506 ~ 3181742 (+)
G274509 NA non-coding downstream 3197 3297337 ~ 3299001 (+)
G274512 NA non-coding downstream 5271 3299411 ~ 3302842 (+)
G274545 NA non-coding downstream 31874 3326014 ~ 3331130 (+)
G274577 NA non-coding downstream 62930 3357070 ~ 3357285 (+)
G274579 NA non-coding downstream 64539 3358679 ~ 3358909 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 398142 2893418 ~ 2894947 (+)
G274270 NA other upstream 611872 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1120837 2031954 ~ 2040427 (+)
G273359 NA other upstream 2813949 477727 ~ 479081 (+)
G274603 NA other downstream 505883 3800023 ~ 3803501 (+)
G274619 NA other downstream 834988 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1261169 4555269 ~ 4558480 (+)
G274953 NA other downstream 1630327 4924467 ~ 4926687 (+)

Expression


Co-expression Network