Item | Value |
---|---|
gene id | CI01000069_03571631_03573352 |
gene name | NA |
gene type | misc |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000069 |
NCBI id | null |
chromosome length | 5329268 |
location | 3563293 ~ 3576335 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000069_03571631_03573352.mRNA | False | 2910 | mRNA | 0.41 | 3 | 3571535 | 3575743 |
TU312899 | True | 13012 | TUCP | 0.39 | 2 | 3563293 | 3576335 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000069_03565665_03568486 | NA | coding | downstream | 3049 | 3565540 ~ 3568486 (-) |
CI01000069_03506556_03507031 | NA | coding | downstream | 63978 | 3506255 ~ 3507557 (-) |
CI01000069_03474790_03478425 | RNF113A | coding | downstream | 93110 | 3474790 ~ 3478425 (-) |
CI01000069_03444473_03455791 | NA | coding | downstream | 113779 | 3444392 ~ 3457756 (-) |
CI01000069_03441535_03443377 | NA | coding | downstream | 128135 | 3441270 ~ 3443400 (-) |
CI01000069_03578433_03584741 | BAXB | coding | upstream | 2690 | 3578433 ~ 3585231 (-) |
CI01000069_03667639_03669979 | NA | coding | upstream | 91877 | 3667620 ~ 3669979 (-) |
CI01000069_03670799_03677837 | NA | coding | upstream | 94528 | 3670271 ~ 3677843 (-) |
CI01000069_03678617_03697993 | PIH1D1 | coding | upstream | 102555 | 3678298 ~ 3698756 (-) |
CI01000069_03721128_03722393 | NA | coding | upstream | 145201 | 3720944 ~ 3722393 (-) |
G275878 | NA | non-coding | downstream | 210834 | 3360488 ~ 3360701 (-) |
G275876 | NA | non-coding | downstream | 214114 | 3357221 ~ 3357421 (-) |
G275772 | NA | non-coding | downstream | 258639 | 3306489 ~ 3312896 (-) |
G275814 | NA | non-coding | downstream | 287344 | 3280912 ~ 3284191 (-) |
G275856 | NA | non-coding | downstream | 310031 | 3261296 ~ 3261504 (-) |
G275750 | NA | non-coding | upstream | 19978 | 3595721 ~ 3627754 (-) |
G275826 | NA | non-coding | upstream | 31709 | 3607452 ~ 3614839 (-) |
G275754 | NA | non-coding | upstream | 37010 | 3612753 ~ 3636263 (-) |
G275828 | NA | non-coding | upstream | 38575 | 3614318 ~ 3633114 (-) |
G275920 | NA | non-coding | upstream | 160911 | 3736654 ~ 3736958 (-) |
CI01000069_03415853_03417644 | LIMD2 | other | downstream | 145161 | 3412973 ~ 3417644 (-) |
G275699 | NA | other | downstream | 493367 | 2992504 ~ 3078168 (-) |
CI01000069_02997434_03008924 | NA | other | downstream | 571102 | 2997275 ~ 3008924 (-) |
CI01000069_02589498_02621318 | SYT3 | other | downstream | 941219 | 2589469 ~ 2621641 (-) |
CI01000069_01645966_01647142 | NA | other | downstream | 1924209 | 1644522 ~ 1647326 (-) |
CI01000069_03768812_03787588 | BRSK1 | other | upstream | 189930 | 3765673 ~ 3787588 (-) |
CI01000069_03804630_03807180 | PRMT1.S, PRMT1 | other | upstream | 228873 | 3804616 ~ 3807180 (-) |
CI01000069_04932463_04940554 | NA | other | upstream | 1363778 | 4932144 ~ 4941471 (-) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
zebrafish (Danio rerio) | XLOC_026466 | zp3e | coding | NC_007114.7 | CM002887.2 | 31875772 ~ 32055378 (-) |
rainbow trout (Oncorhynchus mykiss) | G12390 | NA | non-coding | NC_048565.1 | CM023219.2 | 13581105 ~ 13581310 (+) |
rainbow trout (Oncorhynchus mykiss) | kcnc3a | LOC106600760 | misc | NC_048576.1 | CM023230.2 | 62238004 ~ 62342939 (+) |
mexican tetra (Astyanax mexicanus) | G10838 | NA | unknown | NC_035898.1 | CM008301.1 | 15758762 ~ 15769243 (+) |