CI01000069_03625937_03626925


Basic Information

Item Value
gene id CI01000069_03625937_03626925
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3625937 ~ 3627161 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_03625937_03626925.mRNA
ATGGATTCTCAGATTCGCCAGAACTACGACCGCGACTGCGAGGCTTTGATCAACAAGATGGTGAATTTGGAGCTTTACGCTGGCTACACTTACACTTCCATGGCTCACTATTTTAAACGGGATGATGTGGCTCTTCCTGGTTTTGCCAAGTTCTTCAAGAAGAACAGTGAGGAGGAGCGCGAGCATGCCGAGAAATTCATGGAGTTCCAGAACAAGAGGGGCGGACGCATTGTCCTTCAGGACGTAAAGAAACCTGAGCGCGATGAGTGGGACAATGGGCTGGTTGCTATGCAGTGCGCTCTTCAGCTGGAGAAGACCGTTAACCAGGCTCTGCTGGACCTGCATAAGGCTGCATCTGAGAAGAGAGACCCTCATCTGTGTGACTTCCTGGAGACTCACTACCTGAATGAGCAGGTTGAGGCCATCAAGAAGCTTGGTGACCACATTACCAACCTTTCCAAGATGGATGCTGGCAACAACAGGATGGCGGAGTACTTGTTTGACAAGCACACCCTGGATGGAGACAGCTAAATGCAGAACCCTGCTCCCTGCAAAACCTCCAGCTATACTCCGGTTTAAATCATCACACTAATGTTATCATGCAGCACTTAGGAAAAATTTTAGACTTGAAAGATTGAAAAATTAACATTGAAAAGTTAACATTTAGAGGCTACATGTCCCTGTATAACATGCATGGCACTTTTAAATAGCCATCAAGCCAATGTTTTCTTGAATGTACACTGGTTTTAATCTGCTGAATTTGGTGA

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K00522 FTH1; ferritin heavy chain

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_03625937_03626925.mRNA True 767 mRNA 0.46 4 3625937 3627161

Neighbor

gene id symbol gene type direction distance location
CI01000069_03612923_03614657 NA coding upstream 11198 3612717 ~ 3614739 (+)
CI01000069_03595904_03596883 NA coding upstream 28837 3595726 ~ 3597100 (+)
CI01000069_03585382_03594261 ALDH16A1 coding upstream 31501 3585296 ~ 3594436 (+)
CI01000069_03509187_03563871 KCNC3A coding upstream 61577 3508902 ~ 3564360 (+)
CI01000069_03496673_03500800 NA coding upstream 125042 3496673 ~ 3500895 (+)
CI01000069_03631837_03632897 NA coding downstream 4676 3631837 ~ 3632963 (+)
CI01000069_03636156_03639756 NA coding downstream 8819 3635980 ~ 3639985 (+)
CI01000069_03643296_03647762 SYT13, SYT5B, SYT5A coding downstream 15994 3643155 ~ 3647786 (+)
CI01000069_03766564_03767936 NA coding downstream 139403 3766564 ~ 3768198 (+)
CI01000069_03812664_03832205 AP2A1 coding downstream 185503 3812664 ~ 3832279 (+)
G274564 NA non-coding upstream 169727 3452564 ~ 3456210 (+)
G274592 NA non-coding upstream 203433 3420898 ~ 3422504 (+)
G274589 NA non-coding upstream 213167 3412500 ~ 3412770 (+)
G274588 NA non-coding upstream 213465 3412228 ~ 3412472 (+)
CI01000069_03375220_03376645 LY6E non-coding upstream 249130 3375008 ~ 3376807 (+)
G274601 NA non-coding downstream 31069 3658230 ~ 3658435 (+)
G274651 NA non-coding downstream 101721 3728882 ~ 3731583 (+)
G274715 NA non-coding downstream 110104 3737265 ~ 3737533 (+)
G274716 NA non-coding downstream 133740 3760901 ~ 3761638 (+)
G274721 NA non-coding downstream 145933 3773094 ~ 3773544 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 731049 2893418 ~ 2894947 (+)
G274270 NA other upstream 944779 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1453744 2031954 ~ 2040427 (+)
G273359 NA other upstream 3146856 477727 ~ 479081 (+)
G274603 NA other downstream 172862 3800023 ~ 3803501 (+)
G274619 NA other downstream 501967 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 928148 4555269 ~ 4558480 (+)
G274953 NA other downstream 1297306 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1419066 5045967 ~ 5049408 (+)

Expression


Co-expression Network