CI01000069_03636156_03639756


Basic Information

Item Value
gene id CI01000069_03636156_03639756
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3635980 ~ 3639985 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311499
AACACTGACGCATCATGTTGTGATCGTACAGTATATAAGACAGATGCGCACCTTCATTTCACTCACAGCTTCAGGAAGATCAGAATAGGTTCTTGCTTCAACAGTGATTGAACGGAACTTCGATCTTTATTTAAATCTATTTAAATTTCTTATTTATTTTGCACCAACGTTGTGATAAAAAAACCCCGCTGAAATGGAGACTTCTCAGATTCGCCAGAACTACGACCGCGACTGCGAGGCTTTGATCAACAAGATGATCAATCTGGAGCTTTATGCTTCCTACACTTACACTTCAATGGCTTTCTACTTCAAACGGGATGATGTGGCTCTTCCTGGTTTTGCCAAGTTCTTCAAGGAGAACAGTGAGGAGGAGCGCGAGCATGCCGAGAAATTCAT
>CI01000069_03636156_03639756.mRNA
GTATATAAGACAGATGCGCACCTTCATTTCACTCACAGCTTCAGGAAGATCAGAATAGGTTCTTGCTTCAACAGTGATTGAACGGAACTTCGATCTCGCCGGAATTTATTTAAATCTATTTATTTAAATTTCTTATTTATTTTGCACCAACGTTGTGATAAAAAAACCCCGCTGAAATGGAGACTTCTCAGATTCGCCAGAACTACGACCGCGACTGCGAGGCTTTGATCAACAAGATGATCAATCTGGAGCTTTATGCTTCCTACACTTACACTTCAATGGCTTTCTACTTCAAACGGGATGATGTGGCTCTTCCTGGTTTTGCCAAGTTCTTCAAGGAGAACAGTGAGGAGGAGCGCGAGCATGCCGAGAAATTCATGGAGTTCCAGAATAAGAGGGGTGGAAAAATTGTCCTTCAGGACGTAAAGAAACCGGAGCGTGATATGTGGGGCAATGGACTGATCGCTATGCAGTGCGCTCTTCAGCTGGAGAAGAACGTCAACCAGGCTCTGCTGGAATTGCATAAGGTCGCCTCTGAGAAGGGAGACCCTCATATGTGTGACTTCCTGGAGACTCACTACCTGAATGAGCAGGTTGAGGCCATCAAGAAGCTTGGTGACCACATCACCAACCTTTCCAAGATGGATGCTGGCAACAACAGGATGGCGGAGTACCTGTTTGACAAGCACACCCTGGAAAGCTAAATGCAGACCTCAGACCATACAAAAATGAATAGAAATACTATTCTCTTAAAGATGTTCTTATCAAACAGCTCTTGTGCAAATTTTTAATTTTTGAGAGGTAGAAAAAACAACATCAAGTAAAGGTTCCTGTTACTATTATACAATTATGCAGTGTAAAATGATTACATATTGTGATTCAACATAAGCATTGCTCGATGACAATGTGCACTGACTGACATAGTGAATTTAA

Function

NR:

description
Zgc:109934 protein

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K00522 FTH1; ferritin heavy chain

RNA

RNA id representative length rna type GC content exon number start site end site
TU311499 True 259 TUCP 0.42 2 3636100 3638430
CI01000069_03636156_03639756.mRNA False 933 mRNA 0.42 4 3635980 3639985

Neighbor

gene id symbol gene type direction distance location
CI01000069_03631837_03632897 NA coding upstream 3017 3631837 ~ 3632963 (+)
CI01000069_03625937_03626925 NA coding upstream 8819 3625937 ~ 3627161 (+)
CI01000069_03612923_03614657 NA coding upstream 21241 3612717 ~ 3614739 (+)
CI01000069_03595904_03596883 NA coding upstream 38880 3595726 ~ 3597100 (+)
CI01000069_03585382_03594261 ALDH16A1 coding upstream 41544 3585296 ~ 3594436 (+)
CI01000069_03643296_03647762 SYT13, SYT5B, SYT5A coding downstream 3170 3643155 ~ 3647786 (+)
CI01000069_03766564_03767936 NA coding downstream 126579 3766564 ~ 3768198 (+)
CI01000069_03812664_03832205 AP2A1 coding downstream 172679 3812664 ~ 3832279 (+)
CI01000069_03835903_03837843 NA coding downstream 195918 3835903 ~ 3838319 (+)
CI01000069_03839830_03843013 RRAS coding downstream 199845 3839830 ~ 3843569 (+)
G274564 NA non-coding upstream 179770 3452564 ~ 3456210 (+)
G274592 NA non-coding upstream 213476 3420898 ~ 3422504 (+)
G274589 NA non-coding upstream 223210 3412500 ~ 3412770 (+)
G274588 NA non-coding upstream 223508 3412228 ~ 3412472 (+)
CI01000069_03375220_03376645 LY6E non-coding upstream 259173 3375008 ~ 3376807 (+)
G274601 NA non-coding downstream 18245 3658230 ~ 3658435 (+)
G274651 NA non-coding downstream 88897 3728882 ~ 3731583 (+)
G274715 NA non-coding downstream 97280 3737265 ~ 3737533 (+)
G274716 NA non-coding downstream 120916 3760901 ~ 3761638 (+)
G274721 NA non-coding downstream 133109 3773094 ~ 3773544 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 741092 2893418 ~ 2894947 (+)
G274270 NA other upstream 954822 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1463787 2031954 ~ 2040427 (+)
G273359 NA other upstream 3156899 477727 ~ 479081 (+)
G274603 NA other downstream 160038 3800023 ~ 3803501 (+)
G274619 NA other downstream 489143 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 915324 4555269 ~ 4558480 (+)
G274953 NA other downstream 1284482 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1406242 5045967 ~ 5049408 (+)

Expression


Co-expression Network