CI01000069_03667639_03669979


Basic Information

Item Value
gene id CI01000069_03667639_03669979
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3667620 ~ 3669979 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_03667639_03669979.mRNA
AGGAGGAAAGACCCCGGCCCAAGCCCATGGTTCCACAACTTGCCCCTCCAAAGATTCCAGAGGGTGAGCGGGTAGACTTTGATGATATTCACCGAAAAAGAATGGAGAAAGACTTTCTGGAGTTACAGACTTTAATTGATGTCCACTTTGAGCAGAGGAAGAAAGAGGAGGAAGAGCTGATCGGTCTCAAGGAGAGAATTGAAGAGCGCCAGAGGAAAGAGGATGAGGAGGCTAAGAAGAGAGCAGAAGACGAGGCCAAGAAGAAGAAGGTTTTGTCCAATATGGGGGCAAACTTTGGTGGCTTCTTAGCCAAGGCAGAGCAGAAAAGAGGGAAGCGTTTGACTGGACGAGAGATCAAGAGAAAGACTCTTTCAGAGAGACGCTCTCCTCTTGGCATCGAAAATCTCCGAGAGGATGGGTTGAGGCAGCGAGCTCAGGAAATGTGGAACTGGATTTATCAGCTGGAGTCAGAGAAGTTTGACCTCTTGGATCAAATGAAGAGACAGAAATATGAGGATTTCTCATGCTCAAAAATTAATTTTAACGCTTTACAAATCGGTTTCTTTACATCCTCGGCTTCTAATGCACCTGTGTGCTCACTGTCAGTGGGCAACACTAGCTTCAGAGCTTCCTCTGCTGAGTAACGTCTCTTCAAACAATGAA

Function

NR:

description
slow troponin T 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_03667639_03669979.mRNA True 663 mRNA 0.46 8 3667620 3669979

Neighbor

gene id symbol gene type direction distance location
CI01000069_03578433_03584741 BAXB coding downstream 82389 3578433 ~ 3585231 (-)
CI01000069_03571631_03573352 NA coding downstream 91877 3563293 ~ 3576335 (-)
CI01000069_03565665_03568486 NA coding downstream 99134 3565540 ~ 3568486 (-)
CI01000069_03506556_03507031 NA coding downstream 160063 3506255 ~ 3507557 (-)
CI01000069_03474790_03478425 RNF113A coding downstream 189195 3474790 ~ 3478425 (-)
CI01000069_03670799_03677837 NA coding upstream 292 3670271 ~ 3677843 (-)
CI01000069_03678617_03697993 PIH1D1 coding upstream 8319 3678298 ~ 3698756 (-)
CI01000069_03721128_03722393 NA coding upstream 50965 3720944 ~ 3722393 (-)
CI01000069_03739653_03764284 CPT1CB coding upstream 68471 3738450 ~ 3764284 (-)
CI01000069_03768812_03787588 BRSK1 coding upstream 98613 3765673 ~ 3787588 (-)
G275754 NA non-coding downstream 31357 3612753 ~ 3636263 (-)
G275828 NA non-coding downstream 34506 3614318 ~ 3633114 (-)
G275750 NA non-coding downstream 39866 3595721 ~ 3627754 (-)
G275826 NA non-coding downstream 52781 3607452 ~ 3614839 (-)
G275878 NA non-coding downstream 306919 3360488 ~ 3360701 (-)
G275920 NA non-coding upstream 66675 3736654 ~ 3736958 (-)
G275921 NA non-coding upstream 67493 3737472 ~ 3737689 (-)
G275756 NA non-coding upstream 121610 3791589 ~ 3796952 (-)
G275790 NA non-coding upstream 153413 3823392 ~ 3826580 (-)
G275773 NA non-coding upstream 169255 3839234 ~ 3843586 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 241246 3412973 ~ 3417644 (-)
G275699 NA other downstream 589452 2992504 ~ 3078168 (-)
CI01000069_02997434_03008924 NA other downstream 667187 2997275 ~ 3008924 (-)
CI01000069_02589498_02621318 SYT3 other downstream 1037304 2589469 ~ 2621641 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other upstream 134637 3804616 ~ 3807180 (-)
CI01000069_04932463_04940554 NA other upstream 1269542 4932144 ~ 4941471 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026472 tnnt1 coding NC_007114.7 CM002887.2 32157140 ~ 32170878 (-)