CI01000069_03935114_03939004 (NOSIP)


Basic Information

Item Value
gene id CI01000069_03935114_03939004
gene name NOSIP
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3934308 ~ 3939158 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_03935114_03939004.mRNA
GTATTAAAGAAGCTTTTAGACATAACTTCATTGTGAGCATAAACCTTTAAGAAACACAAAAAGCTGAGTGAGAGAGAAGGTAAAACAGAGGCGAATGTAATTAATACACACTCGGGTCAAGAATAAAGACCCATTCACACCAAAAACGACAACTATATTAGCATCCACACCAACGGACGATAACGGTCTGTTTAAGCGCACGCTCGTGCTTTAACGCGCCAGGTGGATTCTGATTGGCTGTCGTTCATCAGCTGGAATAAAATGCTCTTAAATGTTACTTTAGAGTTATAGTTATTATCATCATCCTTGGTGTGAATTTTAATAGACCAATGGCTTTCTACAGTGTAATGGACTATTTTTAGCAGAATATCTACGATAGATCAAATCAATAGTTTACTTATTTATTTATAATAGTTTTATTTATTGTTTGTTTGTTTGATCACACTTTGGGGATTTATTTTTCGCGTTGACTGCGCGTGAACTTTTATTTTGAAATTTATGAGGAGGCCAGCAGGTTCTTTCCGGTTCACGATCGTAAGAGGTAAACAGCAACTTCTGCGCTTATTCCTGACCTGTACTTATGAATATGATAATACTTTATGATAAAACACATTGTGTTTGATTTATGTGTGTTTCACGGCTTGTATTTTAGTAACATTCACAACTATTATAGATTTAATGATCCTCCTCGCTAGCTCACTAAGCAATTATCCATCAGTGGGCCAACGTGTATTTATGTAAAACTGGGCATTAATTTGTTCACTAAACTCATATAAACGATTAATTTTGTTCTGTAAAAGACAAACATGACTCGACACGGGAAAAACTGCACAGCAGGAGCTGTTTACACTTATCATGAGAAGAGGAAAGACACCGCCGCTTCGGGTTATGGGACACAGAGTGTGCGTTTGGGGAAGGATGCGATCAAAGATTTCGACTGCTGCTGCCTCTCCTTACAGCCTTGCAGGGACCCTGTTGTAACTGAAGATGGATACCTATATGAGAAAGAAGCCATTCTGCAATACATCCTTCACCAGAAAACAGAAATTGCCAAGAAAATGAAGGCATATGAGAAGCAGAAACAGGCTCTGAAGAGTGAAGGCCAGCTGGAGTCCAAGTCTGAGGAGCGAGACAGAGCTGAGAAGTTCAAACAGAGGGAGAACAACATCGTCTCCAAGCCAATCAACCCCTTCACTTCAGATAAATCTAAAGATGATGGAAGACAGAATGGCTCAACCAGCTCCTCCAGTTCTGACACTTCAGCAGGAGAGTCCAGTTCTTCTTCAGCTCTGCCCAGCTTCTGGATCCCCAGCCTCACACCAGAGGCCAAGCCCACCATGCTTAAAAAACCTTCAAAGACAGTGTTGTGCCCTATGTCAGGACGTCCTTTGAAGATGAGTGATTTAATTTCAGTGCGCTTCACTCCACTGGACCCCAGTCTGGACAGAGTGGCCCTCCTCACACGCCAAGACAGATACGTGTGTGCAGTAACCAAAGACACGCTTGGGAACTCGGTGCCCAGTGCAGTTCTCAGACCCTCTGGAGCTGTAGTCACTATGGAGTGTGTGGAGAAGCTCATACGGAAAGACATGATTGATCCAATGACTGGAGACAAACTGAAAGAGAAGGACATAATACCCCTTCAGAGGGGTGGGACTGGCTTTGCAGGCTCAGGAGTGGATCTTAAAGCTAAAGAGGCCAGACCCGTTATGCAAGCATAAATGAGAGGATTAGACAAGGCTTTGACCCTGTAAATATTGTCATTCATTTTGCAGGATTTTTTTGTTTTTTTTGTTTTTTTTTTTTGGGGGGGGGGGGGGGGNCCTGAAGATACTATCATGTTATGTTTACACAATATACAGCATTTTTAAAAAA

Function

symbol description
nosip Predicted to enable ubiquitin protein ligase activity. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human NOSIP (nitric oxide synthase interacting protein).

GO:

id name namespace
GO:0070737 protein-glycine ligase activity, elongating molecular_function

KEGG:

id description
K13125 NOSIP; nitric oxide synthase-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_03935114_03939004.mRNA True 1875 mRNA 0.42 9 3934308 3939158

Neighbor

gene id symbol gene type direction distance location
CI01000069_03927870_03929948 NA coding upstream 3929 3927870 ~ 3930379 (+)
CI01000069_03902139_03920099 TRPM4A coding upstream 14009 3902139 ~ 3920299 (+)
CI01000069_03886826_03898833 SCAF1 coding upstream 35283 3886826 ~ 3899025 (+)
CI01000069_03854857_03870627 PRR12, PRR12B coding upstream 63375 3854857 ~ 3870933 (+)
CI01000069_03845642_03851052 PRRG2 coding upstream 83095 3845642 ~ 3851213 (+)
CI01000069_03953485_03961584 PAX10 coding downstream 14186 3953344 ~ 3961836 (+)
CI01000069_03965213_03971865 NA coding downstream 25954 3965112 ~ 3972048 (+)
CI01000069_03991989_03994139 NA coding downstream 52520 3991678 ~ 3994317 (+)
CI01000069_03995177_04005602 NA coding downstream 55951 3995109 ~ 4005602 (+)
CI01000069_04009856_04015526 THOC6 coding downstream 70698 4009856 ~ 4015627 (+)
G274748 NA non-coding upstream 1904 3932068 ~ 3932404 (+)
G274746 NA non-coding upstream 11737 3922288 ~ 3922571 (+)
G274743 NA non-coding upstream 50551 3883537 ~ 3883757 (+)
G274737 NA non-coding upstream 60328 3873776 ~ 3873980 (+)
G274733 NA non-coding upstream 127249 3804616 ~ 3807059 (+)
G274760 NA non-coding downstream 59825 3998983 ~ 4002223 (+)
G274671 NA non-coding downstream 199972 4139130 ~ 4140762 (+)
G274659 NA non-coding downstream 201722 4140880 ~ 4141167 (+)
G274669 NA non-coding downstream 245044 4184202 ~ 4192064 (+)
G274653 NA non-coding downstream 282264 4221422 ~ 4370572 (+)
G274603 NA other upstream 130807 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1039420 2893418 ~ 2894947 (+)
G274270 NA other upstream 1253150 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1762115 2031954 ~ 2040427 (+)
G274619 NA other downstream 189970 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 616151 4555269 ~ 4558480 (+)
G274953 NA other downstream 985309 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1107069 5045967 ~ 5049408 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location