CI01000069_04037283_04041863


Basic Information

Item Value
gene id CI01000069_04037283_04041863
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4037283 ~ 4041863 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04037283_04041863.mRNA
ATGACTGATACATGCCTGCAGCTGCTCCTTGTCTTGATGGTAACAGAAGTGTCTTCATACCGCCTGTACATGGGACGCCATCTGCTTAATGGCTATAACCAGTTTGAGATGGTCAGTCAGGTGCAGCGAGTGGTTGTTCCAGAAGGATACTCAAGCCCTCAGGAGGGCAGAGATGTAGCCTTAGTGCAGCTGCGCTCTCCGGTCACCTGGTCAGACAGGATTCAGCCTGTGTGTCTACCATTTGCTGGCTTCCAGTTCAACAGTGGAACCTTATGCTACGTTACGGGCTGGGGACACACTCAAGAGGGCGTCTCCCTCACTGGACTTGGGGCGCTACGGGAAGTGCAAGTGCCCATTATCAACCAGTCTTCCTGCCAATCAATGTATCAGATTTTGTCATCTGATTTAATAACAGTTGACGTCCTATCAGACATGATCTGTGCTGGATATATGGAGGGAGGCAAGGATTCCTGTCAGGGGGACTCTGGAGGGCCTCTGGTTTGTCCTGTTGGCAATGGGACGTGGATTCAGGCAGGAGTTGTGAGTTTTGGACTTGGGTGTGCTCAGAAGAACCGGCCAGATGAATGGATGGTAGCGTCACCGGTGCGCGCCGCCTGCAGGCTCAAATCGACACGACACAACAGCGTCAGTGTCCGCACAGTTGCGCAGTTGATATTGGTAACCAAAGGTGGCTGCAAGTCTGCTCAAATTGGTCTTCTGCATCAGCTGCTAAAAGGATTTAAAACGCTATCATGGCGTCAAATG

Function

GO:

id name namespace
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04037283_04041863.mRNA True 765 mRNA 0.52 5 4037283 4041863

Neighbor

gene id symbol gene type direction distance location
CI01000069_04031492_04035239 KAT8 coding upstream 1903 4031492 ~ 4035380 (+)
CI01000069_04026932_04030927 NA coding upstream 6272 4026932 ~ 4031011 (+)
CI01000069_04022324_04024241 RAB35B, RAB35, RAB35A coding upstream 12947 4022324 ~ 4024336 (+)
CI01000069_04009856_04015526 THOC6 coding upstream 21656 4009856 ~ 4015627 (+)
CI01000069_03995177_04005602 NA coding upstream 31681 3995109 ~ 4005602 (+)
CI01000069_04042802_04047285 NA coding downstream 939 4042802 ~ 4047357 (+)
CI01000069_04047810_04052352 NA coding downstream 5713 4047576 ~ 4052646 (+)
CI01000069_04055396_04078361 SETD1A coding downstream 13533 4055396 ~ 4078740 (+)
CI01000069_04089580_04103908 HSD3B7 coding downstream 47717 4089580 ~ 4104659 (+)
CI01000069_04113962_04124908 TBC1D10B coding downstream 71218 4113081 ~ 4125207 (+)
G274760 NA non-coding upstream 35060 3998983 ~ 4002223 (+)
G274748 NA non-coding upstream 104879 3932068 ~ 3932404 (+)
G274746 NA non-coding upstream 114712 3922288 ~ 3922571 (+)
G274743 NA non-coding upstream 153526 3883537 ~ 3883757 (+)
G274737 NA non-coding upstream 163303 3873776 ~ 3873980 (+)
G274671 NA non-coding downstream 97267 4139130 ~ 4140762 (+)
G274659 NA non-coding downstream 99017 4140880 ~ 4141167 (+)
G274669 NA non-coding downstream 142339 4184202 ~ 4192064 (+)
G274653 NA non-coding downstream 179559 4221422 ~ 4370572 (+)
G274775 NA non-coding downstream 215581 4257444 ~ 4306259 (+)
G274603 NA other upstream 233782 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1142395 2893418 ~ 2894947 (+)
G274270 NA other upstream 1356125 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1865090 2031954 ~ 2040427 (+)
G274619 NA other downstream 87265 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 513446 4555269 ~ 4558480 (+)
G274953 NA other downstream 882604 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1004364 5045967 ~ 5049408 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025496 si:dkey-16l2.17 coding NC_007114.7 CM002887.2 32689707 ~ 32696592 (+)