CI01000069_04047810_04052352


Basic Information

Item Value
gene id CI01000069_04047810_04052352
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4047576 ~ 4052646 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04047810_04052352.mRNA
CTATATAATGGGTGAAGGTCCTGGGCTAAAGTTGTACCTTCGATCTGATAAAAGAAAATTGATTTGGTGAAAGAATGATTGAGTTCACAGATGCACTGCAAAGCTGCATGGTAAAAGATATATGGTAATTCTTTTGAGCAAAATAGGCCAAATGGTTATGATAGAGGGCCTGCATGACTTGGGGAAGGAATATCTAATGGGTTTCCAAAATTCCCTTATGGGTTATGAGGAATGATGAACCTAGTGAGAGGGAGCAGAAAAGAAAAGGGGCAATGCGGAACTTGTAGAAAGGATGATGGAGATGGGTGGGGCCTTTCCAGCCTCAAGAGTGAAATGGGGCACCACCCTCATCAACCTTCAATTCGTCTCGCTTCTCTCTCCTTCTCCGTCAGAATGGGCGATCGTGGAGGATTCAATAAGTTTGGTGGGCCCAGGGATCATGGAGCTGGTGGGCCCAATATGCAGGAGCCGGATAACTCTGACAACAACACCATCTTTGTGCAAGGTCTTGGAGACAACTATACTGTGGACTCAGTTGCAGACTTCTTCAAACAGATCGGCATTATCAAGATCAATAAGAAGACAGGATTGCCCATGATAAATCTTTATACAGACAGAGAGACAGGGAAGCTTAAAGGGGAGGCTACTGTTTCCTTTGATGACCCCCCTTCAGCAAAAGCAGCCATCGATTGGTTTGATGGTAAAGATTTTAATGGAAATCCAATCAAGGTGTCCTTCGCCACTCGCAGAGCTGAATTTGGACGCGGCGGTGGTGGCGGCGGCATGAGAGGTGGTCGTGGTCGAGGAGGCGAGATTAAGTCTCTGGGCCAATGGGCCGTGGGGGATTTGGAGGAGGCAGAGGTGGTTTTGGTGGAGACCGGGGCAGAGGCGGTTTCGATCGAGGTGGTTTCCGTGGTCGTGGTGGTGATCGAGGGGGCTTCAGGGGAGGAAGGGGAGGTGACCGGGGAGGATTCGGACCCGGCAAGATGGACTCAAGGGGGGATCACAGGCATGACCGCAGAGACCGGCCTTACTAATGGGAAATTCTTTGTCCAAATAAGATTTTAATTCTGTGTGGGACCAGTATTCACTCCACTTCAACACTTGTTACCTTCTTCATTATGTTTTGTGTTGTATGTTGTTAAAATAAGTGTTTTTGTTTTTAGTTCTGGTAACATAATTTTTTGTACTATTCTCTCTATACTCTGATATTATTAATTATGAATTTTTTTTTTCTCTATTAACTTGTTGGTGCTTAGGTCACAGTAGTAATATTTGTGCAATTTATTAAATATACTTTCTTTGACTTTTTTTTTTTTTTTTTTTTTTAAATTGTGGTTTAAAATTAAAAATGTTTGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04047810_04052352.mRNA True 1362 mRNA 0.44 8 4047576 4052646

Neighbor

gene id symbol gene type direction distance location
CI01000069_04042802_04047285 NA coding upstream 219 4042802 ~ 4047357 (+)
CI01000069_04037283_04041863 NA coding upstream 5713 4037283 ~ 4041863 (+)
CI01000069_04031492_04035239 KAT8 coding upstream 12196 4031492 ~ 4035380 (+)
CI01000069_04026932_04030927 NA coding upstream 16565 4026932 ~ 4031011 (+)
CI01000069_04022324_04024241 RAB35B, RAB35, RAB35A coding upstream 23240 4022324 ~ 4024336 (+)
CI01000069_04055396_04078361 SETD1A coding downstream 2750 4055396 ~ 4078740 (+)
CI01000069_04089580_04103908 HSD3B7 coding downstream 36934 4089580 ~ 4104659 (+)
CI01000069_04113962_04124908 TBC1D10B coding downstream 60435 4113081 ~ 4125207 (+)
CI01000069_04143761_04147538 CD2BP2 coding downstream 91115 4143761 ~ 4147679 (+)
CI01000069_04151875_04159107 NA coding downstream 99229 4151875 ~ 4159191 (+)
G274760 NA non-coding upstream 45353 3998983 ~ 4002223 (+)
G274748 NA non-coding upstream 115172 3932068 ~ 3932404 (+)
G274746 NA non-coding upstream 125005 3922288 ~ 3922571 (+)
G274743 NA non-coding upstream 163819 3883537 ~ 3883757 (+)
G274737 NA non-coding upstream 173596 3873776 ~ 3873980 (+)
G274671 NA non-coding downstream 86484 4139130 ~ 4140762 (+)
G274659 NA non-coding downstream 88234 4140880 ~ 4141167 (+)
G274669 NA non-coding downstream 131556 4184202 ~ 4192064 (+)
G274653 NA non-coding downstream 168776 4221422 ~ 4370572 (+)
G274775 NA non-coding downstream 204798 4257444 ~ 4306259 (+)
G274603 NA other upstream 244075 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1152688 2893418 ~ 2894947 (+)
G274270 NA other upstream 1366418 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1875383 2031954 ~ 2040427 (+)
G274619 NA other downstream 76482 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 502663 4555269 ~ 4558480 (+)
G274953 NA other downstream 871821 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 993581 5045967 ~ 5049408 (+)

Expression


Co-expression Network