CI01000069_04230190_04235064


Basic Information

Item Value
gene id CI01000069_04230190_04235064
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4229369 ~ 4235081 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04230190_04235064.mRNA
CTACAAAAAGGCCTCAGTTAAGCCATTTTGAGAACTTTGCAAGCATGGAGGCAGGGAGAGCTAGAGGCAGAGGAAGAGGAAGACAGAGAGAGAGAGGAGGACGTGGTCGAAGAGGCCACGCAAGGACCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCATAGTGAACCTAGTCAGAGCAAACAATGCAATCCGTCTCCATCAGCTACAGCAACAAATACTTGCAGATAGGCAAGTATTCAACAACATAAATCGAGTAAGCATTACAACTATCAGATGCATCTTGGTAAAGCACAACATGACCATGAAGCAATTGTACAGGGTCCCATTTGAGAGGAACAGTGTCAGGGTCAAAGAACTTCAACATGAATATGTACAGATCAAAAATGATAAAAGGCCCTGTCAAAGATGTGGAAAAACACCTGGTCATGGAAAATGGCAATGTCCAGCCAAAGATGTTTCATGCCATGCATGTGGGAAAAAAGGGCACTACAGCAAGATGTGTAAAACATCCAAAACAGTGCATGCTATTGATGCAGAAGAGTGCAATGAATCATCAGAGCCCTGGTTTTTAGGCACAGTAGAAGCGAACCAGGAAGCTTGGGCCGTGGAGCTGTTCATGAAACACCATAAAGTAAAATTTAAAATCGACACAGGCGCAGATGTTACAGTTGTCCCAGAGTCTACATTCAGAGAGATAACAAAAGGGACAATTACTCTGGAAAATGCAGATAAGCCACTGCTGGGGCTAGGCGGGGCGCCACTTTCTGTAATGGGGATGTCCCATGAGTCACTTAGCAATGTTGAGCTTACTGTGCAAGAGAATGTAAAAGATCTGCACACAGCATTTCTAGGTTGGCCAGCAATTTTAAAGCTCAGTTTGGTAGCTCGGCTCGGCAGTGTGGATGCAGACATGCTCAAAAAAATGTCCCCTAGGAAAGTTCCACTTCCTTTGCTGGGTAAAGTTAAGGATGAATTAGAGCGCATGGAGCAGCTGGGAGTCATAACAAAGGTTGAGGAGCCGACTGACTGTACCCAAGAAGAACGGAAATTAAATGAGGCTGTATGTAGGGAGAAGTACATTTTACCTTCTGTAGAGCAGACGCTTGGACTGCTTTGCGGGGCCAAGGTCTTCAGTAAATTGGACGCAAACGTGGAGTTCTGGCAGATTCCACTGCTGCCGTTCGGCATTGCGTCAGCACCGGAACATTTTCAGAGACGCATGTCCGTGGTCATTGAAGGACTGTCTGGGGTAGTGTGCCACATGGACGGTGTGCTCATCTGGGGTGAGTCTCAGCCTCAGCATGATGAAAGACTACACTCAGTGTTGGCTAGGATTGAAAAAGCTGGGATCACACTGAACTTGGAGAAGTGTAAGTTGGGCAGACGGGAGCAGAAAAGCCCAGCTTATGCAGAAAAACCATACCTTACAGTGGTGTGGGGGCCACCTGCAGGCAAAAGATTACAATACATAGCTACTCTGGGTAATCAAAGGTTCCCTTGACACCATTTAGGTCTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04230190_04235064.mRNA True 2044 mRNA 0.34 5 4229369 4235081

Neighbor

gene id symbol gene type direction distance location
CI01000069_04203202_04214241 NA coding upstream 15044 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 58814 4164128 ~ 4170555 (+)
CI01000069_04151875_04159107 NA coding upstream 70178 4151875 ~ 4159191 (+)
CI01000069_04143761_04147538 CD2BP2 coding upstream 81690 4143761 ~ 4147679 (+)
CI01000069_04113962_04124908 TBC1D10B coding upstream 104162 4113081 ~ 4125207 (+)
CI01000069_04412903_04419976 NA coding downstream 176154 4411235 ~ 4422342 (+)
CI01000069_04425809_04438936 NA coding downstream 188862 4423943 ~ 4439161 (+)
CI01000069_04527086_04527715 NA coding downstream 291920 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 320188 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 327380 4562461 ~ 4568896 (+)
G274669 NA non-coding upstream 37305 4184202 ~ 4192064 (+)
G274659 NA non-coding upstream 88202 4140880 ~ 4141167 (+)
G274671 NA non-coding upstream 88607 4139130 ~ 4140762 (+)
G274760 NA non-coding upstream 227146 3998983 ~ 4002223 (+)
G274748 NA non-coding upstream 296965 3932068 ~ 3932404 (+)
G274775 NA non-coding downstream 22363 4257444 ~ 4306259 (+)
G274779 NA non-coding downstream 33134 4268215 ~ 4268822 (+)
G274781 NA non-coding downstream 35135 4270216 ~ 4272592 (+)
G274823 NA non-coding downstream 193009 4428090 ~ 4428396 (+)
G274619 NA other upstream 95991 4129128 ~ 4133378 (+)
G274603 NA other upstream 425868 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1334481 2893418 ~ 2894947 (+)
G274270 NA other upstream 1548211 2672624 ~ 2681158 (+)
G274953 NA other downstream 689386 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 811146 5045967 ~ 5049408 (+)

Expression


Co-expression Network