CI01000069_04350619_04363291


Basic Information

Item Value
gene id CI01000069_04350619_04363291
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4350452 ~ 4363682 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04350619_04363291.mRNA
ATGTGACTATGAATGAAAACACCATTAAAGCCATCTGTAATCACTACCTAGTGGTCAATTATCTTCCTGCAGTGGTCAATTATCTTCCTGCAGAGACTTCGCCTAATGCCACTTTTGTTGTGTCTCCAGGCCACCATCCAAAAGCTCTTCCAGGAAATTTTGAGGAAGAGGATGAATTTGGTGGCTTACCTGTTATAACTCTGTTAGCACCAGATGAACTAAGAAAAGAAACTATTCCACCATCCCTCCAAAGGCCTCTTAAGAGAGTGGAACAGACTTACCACCAACTTGTGTTGCCTGAAACCTTGAGACGAGAGTGGAACAGACTTACCACCAACTTGTGTTGCCTGAAACCTTGAGACCCTTAGTTCTGAAAAGTCTGCATGGTGACATGGGTGTAGAGCGAACCTTAGACCTTGTTCGCAAACGTCTTTATTGGCCTATATGTCAGCTGATGTCAGCTAATGTGGAAAGCAAGATCAAAACCTGTCACAGCTGTGTACGGTACAAGTCTTTACCTGAGAAAGCTGCACCACTTGTCAATATCACAGCTACAAGGCCACTCGAACTCATATGCATGGATTTCCTCTCAGTGAAGCCAGGTTCCAACCATAGCAAAGACATTCTGGTTATTACCAACCAATTCACTAAGTATGCAGTGACTGTCCCCACCCCAAACCAAAAGGCTCGAACAGTAGCTAAGTACTTGTGGGACCACTTCTTTGTCCACTACGGCATCCCTGAGAAAATCCATAGTGATCAAGGGCCCGGCTTTAAGTCCCAGATCATAAGAGAATTGTGCAAACTCATTGGCACCCAGAAAGTAAGAACAACGCCCTATCATCTGAGAGGGAACCCTGTTGAGCATTTCAATAGGACCCTGCTTAACATGCTAGGAACCCTCGAGAATCAGAAGAAGCTTCAATGGAACATCCGCCTCCAAGGCAAACATAAGTTAGCTGACTGGTGGGAGTCAGATGTGTATGTTGTTGTGAAACAATCTGAAGGTATTCCTGTGTATGTAGTGAGCCCAGAAGAACACTCAAAGAAGAAGGAATATTGTTATGATAAAGAAGTTTCAAGAAGCCTAAGAGTGGAAACCCTAGGTTCAGACCATACCTCAGCAACTGTGGAGTGCTTTCTAGGAAGAACTAAACCACAGCCTCCCAAATTGTTGACCACCATTGGGCAAGACCCTTCAGATGTAACTTTCCCTGAAAATGATAGCTTACCTAATCCTGAAGATAACTTACCTGATTCTGAAGATGATAGCTTATCTGATCCCAAAGATAACTTACCTGATCCTGAAGACGATAGCTTACCTGATCCCGGAGATAACTTACCTAATTATGAAGATAACTTACCTGATCCTAAAGACGATAGATTACCAGATACCAAAGATAACTTACTTGGTCACGGAGATAATTTACCTGATTCTGAAGATAATTCGCCTGATCCTGAAGGCGATAGCTTACCAGATCCCAAAGGTAACTTACCTGATTTTGAAGACGATAGCTTACCTGATCCTGAAGATAACTTACCTGATCCTGAAAATAACTTACCTGATCCTGAAGACGATAGCTTACCAGATCCCAAAGGTAACTTACCTGAACCTGAAGATAGCTTACCTGATTCTGAAGATAACTTACCTGATCTTGAAGACGATAGCTTACCTGATCCTGAAGATAGCTTACCTGATCCTGAAGATAACTTACCTGATCCTGAAGGCGATAGCTTACCTGATCCTGAAGGCGATAGCTTACCTGATCCCGAAGATGATAGCTTACCTGATCCTGAAGATGATAGCTTACCAGATCCCAAAGTTCTGGTGGATCAGTGTCAGCATATCATTATTGTACCAGTTTACAACAGCTCTGCCTCTGCATCACGTCTGCTGAACCCGTCGCATGAACCTTTGGCCAGTGCGTGTTGTTCAGCACTGATGTCATTGGTAGACCACCGCTTCATTGGTAAATGTGACTACAGCGCAGGGGGTAACCGCTGTCTCCATGTGCCTCCATCCACAGACATGGAGGACAGCAGAGATTCACATCACAGACCAGCAGCACTCTTGCTCCTGTTACATTGAATAAGTGAAGGAGGAATCTTTTCTTAGTCTACTTTGTATCCTGCAGTTAATATGCAGATGTGCTCCACAGAGACCAAAATGTAGAGAATGCTAATGACTATGAGACTGATATGGATGATGGAGATCATGAAGATGTGAACTCTGACTCTGACTTTATTTCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04350619_04363291.mRNA True 2256 mRNA 0.43 6 4350452 4363682

Neighbor

gene id symbol gene type direction distance location
CI01000069_04298346_04340021 NA coding downstream 9971 4297974 ~ 4340481 (-)
CI01000069_04265905_04279103 NA coding downstream 71281 4265635 ~ 4279171 (-)
CI01000069_04241400_04252572 NA coding downstream 94920 4241400 ~ 4255532 (-)
CI01000069_04217948_04222207 NA coding downstream 128245 4216694 ~ 4222207 (-)
CI01000069_04195558_04198312 AOC2 coding downstream 151951 4195108 ~ 4198501 (-)
CI01000069_04370591_04375147 NA coding upstream 6214 4369896 ~ 4375147 (-)
CI01000069_04380270_04382951 NA coding upstream 16490 4380172 ~ 4382951 (-)
CI01000069_04387255_04404199 RARA, RARAA, RARAB coding upstream 23315 4386997 ~ 4404343 (-)
CI01000069_04444787_04454292 NA coding upstream 80544 4444226 ~ 4454292 (-)
CI01000069_04574882_04576116 NA coding upstream 210684 4574366 ~ 4576128 (-)
G275770 NA non-coding downstream 134762 4143168 ~ 4215690 (-)
G275808 NA non-coding downstream 140803 4207592 ~ 4209649 (-)
CI01000069_04160575_04161329 NA non-coding downstream 188037 4157983 ~ 4161329 (-)
G275992 NA non-coding downstream 215052 4135088 ~ 4135400 (-)
G275982 NA non-coding downstream 262094 4087961 ~ 4088358 (-)
G276042 NA non-coding upstream 163400 4527082 ~ 4527880 (-)
G276052 NA non-coding upstream 191527 4555209 ~ 4557664 (-)
G276064 NA non-coding upstream 250172 4613854 ~ 4624902 (-)
G276129 NA non-coding upstream 301488 4665170 ~ 4665413 (-)
G276133 NA non-coding upstream 305650 4669332 ~ 4669811 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 543375 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 581232 3765673 ~ 3787588 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 924078 3412973 ~ 3417644 (-)
G275699 NA other downstream 1272284 2992504 ~ 3078168 (-)
CI01000069_04932463_04940554 NA other upstream 575839 4932144 ~ 4941471 (-)

Expression


Co-expression Network