CI01000069_04370591_04375147


Basic Information

Item Value
gene id CI01000069_04370591_04375147
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4369896 ~ 4375147 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04370591_04375147.mRNA
ATGGCTCAGTATACCTGTATAGTACATACTCATCTAGACATCAGGATTTACACTAAAAGGGATCAGAACTATGACACAGACCTATGCCTCACCACAGACCCACCGCTCATTCGTACAACAGTCACAGGCAGCGCTGGCCTTTCACACTATTGCCGCCCAGGGCTGCGTCTCCCAGAAGCATTACAGTTGGGATGTGGAGGAGCTGTTAGTGCACACTCAGGGGCTTATTTTGGTCAGGGAAGTGGTCTGATCTGGTTGGATGATGTGCATTGTTCAGGAAGTGAATTATCCCTCACACAGTGCCCACGCAATCCTATTGGAACACATAACTGCGGTCACAGTGAAGATGCAGGTGTCGTCTGCTCACAGGACATAAAATTGGTCAATGGGTCTGATTCATGCTGTGGAAGAGTGGAGATCCATCATAATGGCACGTGGGGAACCGTGTGTGATGATGACTGGGACATGAATGATGCTGCTGTGGTGTGCAGACAGTTACAGTGTGGATCAGCCATCAGTGCACCTCATAGTGCTGACTTTGGTCAAGGCAGTGGATCGATCTGGCTGGATGATGTTGGATGCTCGGGAGGTGAAGAAAAACTCACACAATGTTCACACAATGGACTAGGAAATCACAACTGTAATCATGGTAAAGATGCTGGTGTTGTTTGTTCAGGTGACCTGCAGAAGCCCTCTCTTTCCCTGATCTCCACACATACAGTTGTTTCTCCTGGAGAAAACATTCAGTTCAGATGCACAACACCTAAATCAAGATGCAACGCTGATGCTGAATTCCACCTCTTCATAAATGGATCATCTATATTATCCTCCCAGAAACATGTATCTAGTGTGACTTTCAACCTTGTTAATGTAAGCGTCTCACATCAGGGCAGCTACAGCTGTAATTACTCCTACAAAAACAGCATTATAAAGTCACCTTGGAGTGACACTTTTGAAATCACTGTGGTGCACTTGCATCAGCCCAGCATTCCCCGCATTGCTCCTGATGGACAGTTTGATGTTGGGCCTCAGGGGCCAGTGATCACCAGGGGTCACAGTTTCACTATCATCTGTTCCACTGAATCTCAGTATACTGGAGGCTCCTTCTACCTGTTTAGAGAAGCAAATATCACCAGGAATCAGTCAGCTGTCGATCACTCTGCATCTTTCTTCTTTCCTGAGGCAGATTATTCACACGAGGGAAACTACAGCTGTGTTTATGAAGTCATACTGTCCTCACGCACCTTCCGTTCATCTGCCTCTGAACTGCTGGTCATCACTATCACAGCCTCCCTGCTTCCTGTCATTGGTGCTGTGGTGTCAGCTGTGCTGCTCTTATTGTCTGTCCTCATAATCATCCTCCTGGTCAAGAGAAGACAAAAACAAAGGAATAAGGAAACTCATTTGAAGTGCTCTTATAAAAAACGAGGTTCAGCTAATATGCATGCAGGTGGATCACAAGATAACAACAATGAAGAGAATGATGAGGCTGATTATGAAAATGTACAACTTGATGAAAACATGGATCATGATGATTCTGAACAGGACTATATTAATATAGACTCTGATCATTCTGAACCGGACTATGTCAAGGTGGACACGGATGACTCTGAACAGGACTATGTCAATGTGGACACGGATGACTCTGAAGAGGACTATGTCAATGTGAATGTTACAGAGAATAAAAGCATGGTGTACAAATCTGATGATAACATTTATGAAAGCCATTGTGCTGAATAGTGTGTGAACCCAAAATACTATAATTAATGAGGCTCCAAACTGATGGTTTTAATGAAAAAGGACCTTTAGAGTGTGATGAACAGAGAGACAACAGATGACTACAATCTTGCAAAGCTTTTGTGCTAAATATGAGTGATGATAATACAGTGCATTCATTCTTCAGTGCATCACAGACTGCTGCACATGTTCCAACTGATATATTTTGTTTAATGTATCCAGTGATGCAAGTGATATCCCAGGGATATAAGACTGTCTCTTGATCACATCTAGTAACAGGTGAAAGAGAGCTTAACAGAACATATTTTTGTTCTGTTTTTCTCACTGTATTTTTATTAATAAGAATTGTTTTTAAATTAAAATATTAGCAACAACTCTTTTACACTTTTAATGTTAACCTTAAAATATGTTTAAAGTGTAAAATAAGAAGATATAAAGAGATACAGTATTTTGGGTATAGACATACAATTTAATGGCATATATGAGTCAAACATTGGAAAATGACAGGGTGTTGTTTAATACAATAAGTAGCAGTATTAAGTGCTCTTCGAGTCTTTTTCAACCTGTGCTCCAAACCCCCTAGTGGGTCATGGAGGTACTGCAGGGGAACTATAAAAAAATGATTTAAAATGATTTGTCGAGGCTAAAAGTTTAATGTTGAAATATAAAGATTATTATATACTGCTAAAGTGAATAAA

Function

NR:

description
Deleted in malignant brain tumors 1 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04370591_04375147.mRNA True 2435 mRNA 0.41 7 4369896 4375147

Neighbor

gene id symbol gene type direction distance location
CI01000069_04350619_04363291 NA coding downstream 6214 4350452 ~ 4363682 (-)
CI01000069_04298346_04340021 NA coding downstream 29415 4297974 ~ 4340481 (-)
CI01000069_04265905_04279103 NA coding downstream 90725 4265635 ~ 4279171 (-)
CI01000069_04241400_04252572 NA coding downstream 114364 4241400 ~ 4255532 (-)
CI01000069_04217948_04222207 NA coding downstream 147689 4216694 ~ 4222207 (-)
CI01000069_04380270_04382951 NA coding upstream 5025 4380172 ~ 4382951 (-)
CI01000069_04387255_04404199 RARA, RARAA, RARAB coding upstream 11850 4386997 ~ 4404343 (-)
CI01000069_04444787_04454292 NA coding upstream 69079 4444226 ~ 4454292 (-)
CI01000069_04574882_04576116 NA coding upstream 199219 4574366 ~ 4576128 (-)
CI01000069_04579172_04593867 NA coding upstream 203462 4578609 ~ 4594023 (-)
G275770 NA non-coding downstream 154206 4143168 ~ 4215690 (-)
G275808 NA non-coding downstream 160247 4207592 ~ 4209649 (-)
CI01000069_04160575_04161329 NA non-coding downstream 207481 4157983 ~ 4161329 (-)
G275992 NA non-coding downstream 234496 4135088 ~ 4135400 (-)
G275982 NA non-coding downstream 281538 4087961 ~ 4088358 (-)
G276042 NA non-coding upstream 151935 4527082 ~ 4527880 (-)
G276052 NA non-coding upstream 180062 4555209 ~ 4557664 (-)
G276064 NA non-coding upstream 238707 4613854 ~ 4624902 (-)
G276129 NA non-coding upstream 290023 4665170 ~ 4665413 (-)
G276133 NA non-coding upstream 294185 4669332 ~ 4669811 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 562819 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 600676 3765673 ~ 3787588 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 943522 3412973 ~ 3417644 (-)
G275699 NA other downstream 1291728 2992504 ~ 3078168 (-)
CI01000069_04932463_04940554 NA other upstream 564374 4932144 ~ 4941471 (-)

Expression


Co-expression Network