CI01000069_04579172_04593867


Basic Information

Item Value
gene id CI01000069_04579172_04593867
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4578609 ~ 4594023 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04579172_04593867.mRNA
ACGCCCCATGAGCAGATATGTGCTTGCAGCATCAAAGGAGAACTGATGACAGAGGAAGGCAGTAGCGGATGGGGTCTGACTGACAGACATCAGTAGGCTGCTGTCGCACGGAGGTTTCCGGGGTTGTTCATCAACGGTCTCTTATTCCATCGCGCAATGAAGGATCAAAACTACAGCGAAGAAATTGCTAAAATACTGGAGGAGGCTCCCTCTGCTCGCAAAGCACTTTTAGACAACTACAACAATTTACACGATGTAGCGAAGTATTGCGAGAACAACTACCTGCAGTCTGGAAATGACACCAGCAAAGCTCTGGAGGAGACCAAGGCCTTCACTGCTCAGTCTTTGGCTAGTGTGGCCTATCAGATCAGCTCTCTGGCCACCAATGTGCTCAAGCTTCTGGATGCACAGACCCTGCAGCTCCGCAAGATAGAGTCCTCCGTCAACCAGATTGGACAGACAGTGGACATGCACAGGGAGAAGGTGGCCCGCAGAGAGATTGGCGCTTTCACGGTTGCCAAGAGGGTTTCACGCAGTCATAAGATTATCCCCCCGACAAAAAATAAAGAAGCCAAGATCAAGTACTCCCGCACACCCATCTCTTTCTCCAGCCTGGACTCTGTTGGCCATGGTGTGAAGGATTCTGGCCAGCCGCAGTTAAAAACAGCTACCATGACGCGGAGCGGCAGCACACTGAGTTCGAGCTTTGGTAAAGCCGTGCCGCCCCCTGTAGTGCCCAGCTGGCCCACCAGCCCTGATAGTGACATCATCAGCACACTGCTGGATGAAGCGCCACCCCCTCCACCCCCACTGATGGAGGCAGAGGGTGAAGAGGATCATGGGCAGAAAACCGGTCCACCTCCACCTCCATCTCCACCTCCACCTCCTCCCCTTGACTGCACCAACATCCCGCCACCTCCTCCCATGCCTGCTTCAATCAGTACATCTGATCCCAGCAGCCTAATGACCATGCCACCTCCTCCTCCACCAGCTCCACCTCTTGAAACAGTGGCCGAGGAGAATGGATTTCCTCTACCAGAAGCACTCTGTGACATGCCTCCTCCACCAGCCCCTGATGGCCTTGATCTTCCAACCCCACCGCCTCCGCCTGGCGATGAGAACTATGATGCTCTGCGTTCTCGCCGGTCACGAGTGCGACGTCATCCTCCTAGCTCTCGCTCTCTCTCTCTGAGGGTCCGCATGGGCCCCAGCGCTCGCTCGCTGTACACACGCTCGCTTTTTCTGCCCTCTGCTCAATCACACCTTGAGATTCCAGCACCGCCCCCATCACCACCAGTAGATGACTTTGACAACTATGAGGAAATGCCCCCTTTACCTCCCCCTATTGATTATGACATATCTGCACCAGCTGACTATTTGGAGAAAGTGGTGGCACTATATAACTTCAACACAGGCAAGCCAGGTGACCTGGTCTTTCAGGAGGGGGACATCATCTACCTCACCTGCAGGAATGATGATGGCTGGTGCGAGGGCGTTCTGAATGGAGTAAAGGGTTATTTTCCTGGCAACTATGTGGAGTCCACCGCTTAACTGGCCATAAGAATCCAGAATATCAGTGAACCAACTATTTGAGACCTATAAGGCACTTTGTATTCGCATTTTATAAAATGAAACAGTGAAACGATTGGCTGTTGAAATGCTTTTATACTATGTTGAAGTTTTAAAACATTCCAACTAACAGCAGAGAGGAGTTTGTGTGGACATGAAAAGTCTATTTTGGTCTTAAATAATGATATTGATAATTGATCTCTCAGGACTTTAAGTTATAATCTAAATGTACAATATATAAAGAATCATTTTTGTACATTTAGCTGTATTTGAGAAGTTCACAAAGCAGATAGTGTGTGGTATTTGTTTAAATTATGTCGAGTAAATAATGAAATAATATATTTGTGTAATATAATTTAGTTTTCTAATTGTACACCTTTATTACTCATAAATTGATAACATTTTATTGATTCCCTAGCAGATGAGTAGCAGTATTTTCCCAAACTTTTTTCACCCTAGTAAGTGACTGAAATCTGTTAATATACTCAATTCAGTCACAATTTCATGATACCAAGTAGGCATTTACAGTGCATAGAATCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04579172_04593867.mRNA True 2114 mRNA 0.47 9 4578609 4594023

Neighbor

gene id symbol gene type direction distance location
CI01000069_04574882_04576116 NA coding downstream 2481 4574366 ~ 4576128 (-)
CI01000069_04444787_04454292 NA coding downstream 124317 4444226 ~ 4454292 (-)
CI01000069_04387255_04404199 RARA, RARAA, RARAB coding downstream 174266 4386997 ~ 4404343 (-)
CI01000069_04380270_04382951 NA coding downstream 195658 4380172 ~ 4382951 (-)
CI01000069_04370591_04375147 NA coding downstream 203462 4369896 ~ 4375147 (-)
CI01000069_04595809_04598174 NA coding upstream 1727 4595750 ~ 4598174 (-)
CI01000069_04599199_04600481 RL23, RPL23, RPL23.L coding upstream 5146 4599169 ~ 4600481 (-)
CI01000069_04603992_04607459 NA coding upstream 9076 4603099 ~ 4607586 (-)
CI01000069_04628032_04638137 SGSM3 coding upstream 33830 4627853 ~ 4638137 (-)
CI01000069_04692723_04695795 ELFN2 coding upstream 98469 4692492 ~ 4696567 (-)
G276052 NA non-coding downstream 20945 4555209 ~ 4557664 (-)
G276042 NA non-coding downstream 50729 4527082 ~ 4527880 (-)
G275770 NA non-coding downstream 362919 4143168 ~ 4215690 (-)
G276064 NA non-coding upstream 19831 4613854 ~ 4624902 (-)
G276129 NA non-coding upstream 71147 4665170 ~ 4665413 (-)
G276133 NA non-coding upstream 75309 4669332 ~ 4669811 (-)
G276094 NA non-coding upstream 105248 4699271 ~ 4703469 (-)
G276114 NA non-coding upstream 110029 4704052 ~ 4710962 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 771532 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 809389 3765673 ~ 3787588 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 1152235 3412973 ~ 3417644 (-)
G275699 NA other downstream 1500441 2992504 ~ 3078168 (-)
CI01000069_04932463_04940554 NA other upstream 345498 4932144 ~ 4941471 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location