CI01000069_05042346_05044105


Basic Information

Item Value
gene id CI01000069_05042346_05044105
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 5042275 ~ 5045235 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_05042346_05044105.mRNA
AGGCACAAAAATACAAATGCAATTCAACCTCTCCACACTACTACTCTTCCCCCTAAAATGGCTGCCTGGAGCTCTTTTATAGGCATTGGCTCCTCCCACCTTTGGAACATACCATTTTAGGGGGAAACCTATATGTTACAAAGAGGTGACAGGACTTAAACAAACAGACATTCATTACATTTCAACTCTACAGCATGCAACATTTACATCAATTAACATTTAAATGATTCAAGACAATTAAGACATTTAAGGAAATACTTAAATCCCACGTTCTCCCCCTCCCCTATGTGGTCAGAACCAGATGGAGTAATCTTCCATGAGAAAATAGGCTTGTTCGAGATGCATTGGCGCTGTGCAGACTGATTGGTGTATGACATCAAAGTAACACAAGAGCGATTCAAAAGTAGTCGTATGCTCTCCAAACGCTCTCGCGGTACTTTGATGCTATACACCGATCGGTCTACGCAGCGCTGATGCATCTCGAACAAGCCTAATGTTAGGTTTAAATATGGCTTCTTTCCATGTGTACAGGTTTGGCAATTGAGAGGTGAACCAGAAGGTATGTATAGCTGAAATGAAATGAAACTAACAACTTGGGACAATTAATAAGATGATACAACACCAAAATCGAGCTACAAACACACAACTACAAAAGGATTGCATAATGGTGGAAACAGTTTGTGTGTGCACATACCCACGCTCAGTCCCTTCATAATAAAAGTGCCTTTCCCAAGTTTTTTACTGCTTTGCCCCGGGTGAGCCTGCTAACATAGCAGCTGAACAGCACACCTTCAGTAAATTATGTTTTATTTACAAAGTTCAGGAGGAGCATGGTCAAATAATCTATCCAATCATCACGTCATCTCAACCAGCTGTCAACAGTCAGTAATCAACATATCTACACAATCAGCATGAGTGCAGGCCTATATGCCTATATGGGGGGTACTCTGGGTTCGGGCCAAATACCGAGGTCGGAGCCCTCTCCCCAGACAGCATGCCAAATATCCATACCATGTATTCTATCTGACTTATTTGTAAGTGTGAACTCGTGAAACTAGACAGTTTTACAGTATGTTGTTGCTTTGCGAGAGCTTGATGTTTCATGTGAGTTTGGTGCCAGTACTGATAAAATGAATCACAATCAGTTAGTGGAGAATGTGCTTAGCCCACAAATACTTGAGAGAATTTTACTAGAAACTGATCTCACACTAGACAGAGCTGTTACAATAGCAAGCCAGATGCTGCCGATCAGGCTACATCCATTTCACACTCCCGCCAAGTTACCGCCCCCGTACAAGCAGTGCAGCACACGGGAATATTCAGCTCGTACTCCCAACATTATAAGCACAGTGACTATACCTACTTCTGACTCACAGACTTGTGTGGTGGATTTGGGGATCGACACTGGGTCTTCCGTATCTATTCTGCCCTACAGCACTTATGCATGCCATTTCAGTAACATTGTGCTGTCTCAACTCACTGCCAGGCTTGTGACATATTCAAAAACCCAAATTCCAGTGTCTTTTTGTGGACTTTTTCTGAGTCACTGTGTAAAGCTGGATGAAACCGTCACACCTGTGTGCCAAAATCTTTGCCGTCTGCCACTGTCTGTTCATCTCTGCATGGGTGTCACCAATTGTTGTTACGCAGAAAAAAAGTCAAATAATGCTGCTGCTCCAGTTCCTGTTGATGATGTTGATGTTGATGAGGAGTTTGTTGCTTTTCTATCTGCTGCCTGTCTGCTGCTGATGTTGATGCTGCATGTGCTTCTTGCCCTGCTCTAACCAAACTTTGTACACAGATGTCTAATGCTTCACCCAACAGACAGGACATTGAGTTGTTGCCATACTATAAA

Function

NR:

description
PREDICTED: uncharacterized protein K02A2.6-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_05042346_05044105.mRNA True 1855 mRNA 0.43 4 5042275 5045235

Neighbor

gene id symbol gene type direction distance location
CI01000069_05025745_05032197 YIPF2 coding downstream 10078 5025297 ~ 5032197 (-)
CI01000069_04996783_05001227 CLPP, CLPP.L coding downstream 41048 4996340 ~ 5001227 (-)
CI01000069_04985959_04986408 NA coding downstream 55867 4985693 ~ 4986424 (-)
CI01000069_04983344_04983640 IGHV4-2 coding downstream 58635 4983322 ~ 4983640 (-)
CI01000069_04942590_04973602 NA coding downstream 68612 4942411 ~ 4973663 (-)
CI01000069_05100248_05121420 TNRC6C1, TNRC6C coding upstream 54832 5100067 ~ 5121420 (-)
CI01000069_05227862_05278522 SEPT9A coding upstream 182627 5227862 ~ 5278522 (-)
CI01000069_05321785_05324036 NA coding upstream 276036 5321271 ~ 5324097 (-)
G276107 NA non-coding downstream 32802 5004379 ~ 5009473 (-)
G276071 NA non-coding downstream 249472 4791382 ~ 4792803 (-)
G276114 NA non-coding downstream 331313 4704052 ~ 4710962 (-)
G276094 NA non-coding downstream 338806 4699271 ~ 4703469 (-)
G276133 NA non-coding downstream 372464 4669332 ~ 4669811 (-)
G276193 NA non-coding upstream 14098 5059333 ~ 5059568 (-)
G276103 NA non-coding upstream 40882 5086117 ~ 5089577 (-)
G276078 NA non-coding upstream 48883 5094118 ~ 5096986 (-)
G276095 NA non-coding upstream 93123 5138358 ~ 5152509 (-)
G276200 NA non-coding upstream 109801 5155036 ~ 5155302 (-)
CI01000069_04932463_04940554 NA other downstream 100076 4932144 ~ 4941471 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 1235198 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 1273055 3765673 ~ 3787588 (-)

Expression


Co-expression Network