CI01000069_05064327_05071992 (SLC25A23B)


Basic Information

Item Value
gene id CI01000069_05064327_05071992
gene name SLC25A23B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 5064116 ~ 5072032 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_05064327_05071992.mRNA
CTTTAAATACACGCTCTGGCGGGACTCTGACAGGTGAACGAGGCTATATATTAGATTCTGCAGTTTTTTATTTACCTCAATCCACAAATCCTCAAAGTGGTCTTTGCTGAAGAAGCACCTGTATTTGAGAGGTAGGATGCTGATCCACTACCTAACACAGCTCTGATTCTCGAGAACACATTTGGACCATATTCACCGTCAGCTGTTTCATATGGGCGAAGCGAGAACTCGGTTCCCTTCGTGTTGGACATGGGCTCGATGTCAAGATAACGGTGTGTCCGATCCAGAGCGGGAGAAACGATGGGCCGAACTGTTCGATCAGCTGGACCTAAATAAAGATGGGAGGATCGATGTGAATGAACTGCGCACCGGATTAACCTCATGGGGGATCCTTCGCAGTGAGGTAGACGAGTCTTGTTCTTGCCAAAGCGACTTGAAAAACAGTGCATACAGTATGTTGTGTTGTGGCGATTACTTCAGCAGGCATGGCCACAGATGCAGTGTTAAATCAAGTTTACATATAACTGCACTTTCCACCTCCTCCACCCCTCAGATTGTACGTGTGAGTGACACCAATCATGACGGCCAGCTGGACATCGAGGAGTTCACACGGTATCTGCGCACACACGAGAAAGAGCTCCGACTTATGTTCCGCAGCCTGGACCACAACAACGATGGTCACATAGATGTTGCAGAAATTCAGCTCTCCTTGCGCAGCCTTGGAGTGAATGTATCCACAGAGCAGGCCTCCAGAATCCTGCAAAGCATAGACAGAGACGGCACTATGACCATTGACTGGAATGAGTGGCGGGACCATTTCCTGTTTAACCCCTTGCACAACATGGAGGACATTGCCCACTACTGGAAACACTCTCTGATGTTGGACATTGGAGAGCAACTGACTGTGCCAGATGAGTTTTCGGAGAAGGAGCGGCGTTCAGGTGTGGTGTGGAGACAGTTGGTGGCCGGGGCAATGGCAGGAGCCGTTTCGCGAACAGGAACTGCTCCTCTGGATCGTCTTAAAGTTTTCCTTCAGGTCCATGGCTCCAGTGGTGTGAGTTTGTTGGGTGGCTTGCGTGGAATGGTGCAGGAGGGAGGACTGAGGTCTCTTTGGAGAGGCAACGGCATCAACGTCCTTAAAATTGCCCCGGAGTCAGCTATCAAATTCATGGCTTATGAGCAGATCAAACGGCTGATCAGAGGCAATAAGGAGGGTGGTTCTCTAAGGGTTCAAGAACGCTTCATTGCTGGCTCACTGGCTGGAGCTACAGCTCAAACCATCATCTACCCCATGGAGGTGATGAAGACACGTCTAACCCTCAGAAAGACAGGACAATATTCTGGCATGGCAGACTGTGCCAAACAGATACTACGTAAAGAAGGAGTGCGCGCGTTTTACAAAGGCTATTTGCCCAACACACTTGGCATCATCCCTTATGCTGGCATTGATCTGGCTGTCTATGAGACTCTAAAGAATGCTTGGCTACAGCGGTACTGCATGGGCTCGGCAGATCCTGGGGTTTTAGTGCTTCTCGGATGCGGCACTGTGTCCAGCACGTGTGGGCAACTGGCTAGTTACCCGCTGTCTTTAATCCGCACACGCATGCAGGCTCAGGCCTCTGCAGATGGCACTCCACAGCTGACAATGGTTGGCCAGTTCAAGCACATTGTGTCCCATGAAGGCGTTTCTGGACTTTACCGTGGCATTGCCCCCAATTTCCTCAAAGTCATTCCTGCTGTTAGCATCTCTTATGTGGTTTATGAGCACATGAAGAAAGCACTGGGAGTGGGATCCTAAGGTAGAATCAGAGTGAAAAAGAAAGAGAAAACCTGTATTA

Function

symbol description
slc25a23b Predicted to enable ATP transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to several human genes including SLC25A23 (solute carrier family 25 member 23).

GO:

id name namespace
GO:0006810 transport biological_process

KEGG:

id description
K14684 SLC25A23S; solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_05064327_05071992.mRNA True 1838 mRNA 0.50 11 5064116 5072032

Neighbor

gene id symbol gene type direction distance location
CI01000069_05046565_05048523 NA coding upstream 14708 5045967 ~ 5049408 (+)
CI01000069_05033299_05034403 NA coding upstream 29511 5033299 ~ 5034605 (+)
CI01000069_05002707_05021316 CARM1.L, CARM1P1.L, CARM1 coding upstream 41034 5002707 ~ 5023082 (+)
CI01000069_04990240_04994522 ALDH3B1 coding upstream 69247 4988735 ~ 4994869 (+)
CI01000069_04981836_04982608 NA coding upstream 81020 4980959 ~ 4983096 (+)
CI01000069_05077178_05084933 ZNF207B, ZNF207 coding downstream 5146 5077178 ~ 5085462 (+)
CI01000069_05086587_05092363 NA coding downstream 14252 5086034 ~ 5092572 (+)
CI01000069_05097987_05099733 NA coding downstream 25955 5097987 ~ 5099841 (+)
CI01000069_05150719_05164593 NA coding downstream 76027 5148059 ~ 5165388 (+)
G275048 NA non-coding upstream 24201 5039622 ~ 5039915 (+)
G275047 NA non-coding upstream 24649 5039049 ~ 5039467 (+)
G275017 NA non-coding upstream 76126 4987765 ~ 4987990 (+)
G275008 NA non-coding upstream 77849 4969222 ~ 4986267 (+)
G275022 NA non-coding downstream 22080 5094112 ~ 5096981 (+)
G275065 NA non-coding downstream 45710 5117742 ~ 5117956 (+)
G275085 NA non-coding downstream 99834 5171866 ~ 5173310 (+)
G274953 NA other upstream 137429 4924467 ~ 4926687 (+)
CI01000069_04556116_04558002 PYY, PYYA other upstream 505636 4555269 ~ 4558480 (+)
G274619 NA other upstream 930738 4129128 ~ 4133378 (+)
G274603 NA other upstream 1260615 3800023 ~ 3803501 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025531 slc25a23b coding NC_007114.7 CM002887.2 34220194 ~ 34230565 (+)