CI01000069_05150719_05164593


Basic Information

Item Value
gene id CI01000069_05150719_05164593
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 5148059 ~ 5165388 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_05150719_05164593.mRNA
CTATAAAGACCCCTGTCATTATACTCAAATCACGTAGGTCTTTCAGCGATTGCACATTTGTCTCAATAAAATGCAAAACATCTAACAGTTCAGCACACTAATGGACTTAGCATAAGGGGAAACTCTTGTAACGGGGGACTAAATTGAGAGTGATCAGTTCTGAGGTTATTAGTGATGCATCAAGGGGGAAAAAAAGTTGTCAAATGAATTTTAGTGAGATTAGTACAAACCCTGTACTTAGCCATGGCCTTTCATTCTTCATTCTTTCAATTTCCAGAGAGCTTTACGCTGGACCTATGAAACCTTAAAGGGATAGTTCACCCAAAAATTTAAATTGTCATCATTTCTCTTGTCATTCCAAACACGTATGACTTACTTTCTTCTGTGGAACACAAAAAAGATAATGTGAAGATTGTATCAGTGTTTTTATCTATTCAATGAAAGTCAGTGGGGTCCAATGTTGCTTCGAATTTGTTCACAGTATCAATGGGTGAACTATCCCTTTAAGGCTTAAAGAGACCAGACATGCCCACAAATTGTCCACAATACATTCACTGACCATCTAATGCATGCTGCACACAATACTTGTAAAAATAATAAGCTTTAATCAGACTGAAGACTGCTACGCAACCTTTCAAAAAAGAAATGATTAATTATTTATAAAATATAATAAATATATATAAAAGCACAAGATATTTAGAGTTTTGTTTAAGGCACTTTATAGTAAGCAAACTAGGTATCTAGCTTTGTTTGCTGCCTGTGAAATAATCAATATTAACTACTTTTGAGGAAACAAAAACATAGACAGAGAAGTCTAAACACATTTCAACAGTTCAGGGAGACTGTCATCATGGCTTATTCTGAATAAGATTTATCTGTGCCTTTCTATTATTGTGGTATTCATCCATTGCAGATTTACCCACCCCTAAACACCACAAACTGTGGCTCGCTTTACAAGTCGGTCAGAGAGCCTCTTCCTGTCTAAGTGGGCAGAATAAGCCACAAATATTCTAAACAACATAAAACGTGAATTTCAGATGAACTATCAAATAACTGTTACTTTCAGCACCTCACAATTGCTCTAGAACAGTGTACGAGTTATAGACTCCATTATAGACAGACTCCCAGCCATATGTGTTATTAAAATTTATGATATTAAGACATCCTGACAGGTTTGATGAACAGGAAGGACTATACTCCTTTACTGTAACTGAGGGCTGCCATTTTGCAGGCAAGCGAGCAGGTGAAATGTTGCATTCTACGAATAAAACGTGCCTTTCAAAAGGTTAATGAATTCAGATAACTGCTACAAGTGTGTCTCAGAGAGGCAAACTTGCCCTTGAAAGACTCATCGGAGCATCCCTTTGGCCTGCAGTTTTCAACCAATCAAAAAAAGAATGTAAAGCAAATGCCAAAAACACATCCTGAAGGTTCAAAAACTCAACTTCCTTTCATCAGACCTGCATGAATGGAGAAAACAGCATAGAATAAAGCATGCAAAACATAAAAGTATCTCTAGTACATTAATATCATCTATTATGATGAACAAGTCAGTGGGACAGTCACAATCTTCAGAGATCAGCATAAATCTCACTTTGGGAATGACAGCTGTTGGTTAGTGTCTTCTGTCCAAACAAATAAAATGACTGTGCTATTGATGAGCCAGGTTGATTCAAGGCATTGATGTCAAAGCTTGACAAGACACCAAAATCTGCACTGTGCAAAACATTAGCAAAAGACAGTAAATACCAAAAATCTAGAAAAACATTACAAAATGTTTCAAAGTGGCTCAGAAAGGAACGTGGGAATTAATGACATATTTGCTCAGCTATAAGCGTTACGAGTCTGACACCAGTGAGGAGCCTCTATTTTATATTAGAATACAGATGCTAAACTGATACATGTGCCAACAGCGCAAAGTGCCACATCACCAAGTGTAGAAAATAGCAACATAGTTTCAGGTGTAAAATGTGTATACCAGAAAATTAAACACGCGCACACACACAAAACAGAAAATTACAGTTGTTCGCAGGCAAAGAGATAAACACCTGCATGTAGCGCTAGCTTCACAGTAATTTGTTTGAAAAATAAAATGGCAATGATTTTACTTCAACAAAACTCTCTACTGTTTTAAATTTTATTTTTATTACAATTAGCATTAGTTATACTTTCATTCTGTTTTTGTAACATATCATGATTTTTGGCTTTTACAGAAACCGGTTAACCCCATCATTGATCTAACCATGGAAATGACAAGCAATCCATGGTTTTATCTGTGGTTACTATGGTCTTGTTCAAAATGCCACAGTTTCTATACAGGAACTAAGTTTCATAAGGGAATCAGACACCAGACTCAGCAACAATGATTCCACTTCAATAACCAAAAGCTACAAATGACCAAACATGAAGCCACATGGTGTAAATCCCAAGCCACAATAATGCTGGTAAGGCTTTATAAGAACAAGCTGAGAGGGGCAATGTGACCTAAGCTTTATGGTAATCTGAGCATTAAGTGGCCTCTTTTTGTCTGACCCTTTTCACTCCTGGAGAACACACAGCCCTTTTCAAAAGGTCTGGCTCTGACAGGGGGACCCTGACCCTGTGAGGGGAGCTGAAACTCTCCCTGCCAAATTAGCAACTGCACCACCACAGGAACAGTCATGGGGACGTTTGACATTGGTGCTGTCCTCAGACGCACAGGAGCAACATCTCAGAGCTGCAAAGGAGGCAACCCAGACTTCACCCAGCATCACAGTGATGAATGCATCCCTCCGGTCAATGACCCCAAGGTCACACGAACAGAGTATAGTGAAGTAGAGCCACTGCACCATGCGACATGCTCCCAGCCCACTCAGACCCTCTGCAGCCTTATTACAGAGGTCTGCCATTCAAAAGCATTACCCGCGTGTCACAGACTGCAGGCCAAGCAATCTCACATGCCACACTGCAGAGTGACACCACATTTATTAAACTTCTCCACTGGGCACATAAGAGGACACGCACACACACTCCCTCTCTTCAATGCCAATGGCCAAGGAAATGGAATTGGGGGGAGGGGTGATATGAATCTGTTTTCGCATTTGAAAAACCAAAGAGTTCTGCCAAATCAGCGCAGCACGTCTCTGACAAACACTCTGTTTTTCACCCTCCTCCCAATGAGCCGTTACACTGAGTTAGTCAAACATAAGGCAGAACAGCTCACGGCTGCAGTCTTCTTCTGAAAACAGACTGCCGACCTCCAGACACACACACACACACACACACCCACCCACACACACACACACACACAGAGAAACACCATTGCAGCATCTGTTCTACTAACCATTACTGCTACAAGTCTCATTCTCACAACAGCCCGCATTTCCTTCCTACTAATTAACAATTCTCATAGACTCCTTGAGTCACAGAGTTTGAGGACTGTCTTTTTTGTAGATCAGTTTCAAATGATTACACGGCCTGCAATTGAGAGGATGTTCTCGGCAGAACAAAAACAAATGATTTCCAGCTGTGATGACCTAACATGCAGTGTACTTCATGATAACGTGTGTCTTTAGCATCAGAGCATTGGACTTCCAGTGAATCCCTATCAGATAGTACACCCAAAAATGAAAGGTTTGTTATCATTTCCTCACCCTCGTGTCGTTTCCAAAACTGTATGACTCTTTCTTCCGTGGAACACAAAATAAGATATTTAGAAATATGTTGGCAATAAAATGGAAGATTTTACAAAGAACTGTTTTTTGTTTATACAACGAAAGTCAATTCGATCCAATTTTGTTTTTGGACTACATTGACTTTCATTGTATAAACAAAAACAGTTCAAAATATCTTCCACATAAGAAAGACAGAGTTTTGGACAAATGACAAAATTTTCATTTTTAGCTGATCTATAATCAGTTTTAAGCTTAAAGCCCTGATTTAGTAATGTAACAACTATCTGACTAAGCAGTCTGATGTATACTATGAATTCTCTGTAAATTCTGCCGCATTGTCCTGTTCTTTGTTATCTTTGCGGA
>TU312037
GCGATATACTAACATTCGCAATAGTTTTTTTTATCAACATTTAGAAAATATCGCAAAAGTTTTGCACAGATCTGTAATGGAAACCCGTCTACTGCTGTGTGTACACTTGGATGGGTGAAATGCAGAGCACAAATTCTGAGTATGTATGGAATACCATACTTGGCTACATGTCACGTCACTTTCACTATTATTCACCCACTCTTTCTCTTCTCCCCTTTTCTAGTCAGGACATATATTCTACAGAGAGTGGGTCCACATAATCCCTAGACATGCAATCTACCAAAGTTATAAAAAAAATAATAATAATAAAAAAAAAGACTCTCCTTTAATACTATTAAGGCTATTTGGGATATTTAAAAAAAAAACGTTTACTATATGCCAGGAAAAAATCTAGTCATCAGTCTTATCATTTACATAAGTAATAGCACACCTCTCCTTAACAAACCGCATAATTTGAGGTATCATTCATGTCCATAGCACAAAAAGGGCGGAATAAACCATTTAGCACTATCAAGTCTTTAGCACCTTCACAAACACCATTACTCACTAAAGCTAAGCTATCTAACTATCAAATCCTGAAAAGAGATTTTCTTTGAATTACATGAGAGAAACCCCAAACAAATCAATTTCCAGTGTTTCTTTGCGTTCTAGTTGTGTGTGTGTTTGGCTTGCTGTGTTGACCTGCAGAGTTCTGCCAAATCAGCGCAGCACGTCTCTGACAAACACTCTGTTTTTCACCCTCCTCCCAATGAGCCGTTACACTGAGTTAGTCAAACATAAGGCAGAACAGCTCACGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_05150719_05164593.mRNA False 4016 mRNA 0.39 5 5148059 5165388
TU312037 True 797 lncRNA 0.37 1 5163780 5164576

Neighbor

gene id symbol gene type direction distance location
CI01000069_05097987_05099733 NA coding upstream 48218 5097987 ~ 5099841 (+)
CI01000069_05086587_05092363 NA coding upstream 55487 5086034 ~ 5092572 (+)
CI01000069_05077178_05084933 ZNF207B, ZNF207 coding upstream 62597 5077178 ~ 5085462 (+)
CI01000069_05064327_05071992 SLC25A23B coding upstream 76027 5064116 ~ 5072032 (+)
CI01000069_05046565_05048523 NA coding upstream 98651 5045967 ~ 5049408 (+)
G275065 NA non-coding upstream 30103 5117742 ~ 5117956 (+)
G275022 NA non-coding upstream 51078 5094112 ~ 5096981 (+)
G275048 NA non-coding upstream 108144 5039622 ~ 5039915 (+)
G275047 NA non-coding upstream 108592 5039049 ~ 5039467 (+)
G275085 NA non-coding downstream 6478 5171866 ~ 5173310 (+)
G275086 NA non-coding downstream 9094 5174482 ~ 5174981 (+)
G275087 NA non-coding downstream 9730 5175118 ~ 5175383 (+)
G275035 NA non-coding downstream 19343 5184731 ~ 5185209 (+)
G275101 NA non-coding downstream 20665 5186053 ~ 5186900 (+)
G274953 NA other upstream 221372 4924467 ~ 4926687 (+)
CI01000069_04556116_04558002 PYY, PYYA other upstream 589579 4555269 ~ 4558480 (+)
G274619 NA other upstream 1014681 4129128 ~ 4133378 (+)
G274603 NA other upstream 1344558 3800023 ~ 3803501 (+)

Expression


Co-expression Network