G273488


Basic Information

Item Value
gene id G273488
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 66298 ~ 66999 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU310335
TGTGTTTTACATATGTTGTTACTCACCCAATCTCTGGGTCAGCCCAAACAGGCTTTTTCAGCACAGTAGGGGCCGTATAGCTAACAGGCTTGTACTGGGGCCAGTCTGTCTCCCAGTCAACTTTGTCATCTGGGACAGGAAAGCGGCTGGTGTCTGAGCCAGTATATACTGGACAACGAGCCTTAATGTGCGCGGAAGGAGACATGTAGACAGATGTTGATGAACAGCGACTGGAAATGCTGCTAATGGCGTTCTTCCTGAGATTCCACTTGTACCAGCAGGGTATGGAAGCCCAATAAGACTAAGAGCTATATGCACCGATGCAACCCAGTTACGGGAAACTGTTTTCATTCCAAATCAATATATGAAACCCAGAGCCGCAGTAACCAGGAAGCGAGAGATCAGCCCAGCCTTTCAGTGACGCAATTCATGCGACTTGCTGTTATGATCACGAGCGCTAGGGTGCTCTGCTGTATGATCTGTACAATCTCTCTAGTACAGTTGTTCTCAACCATGTTCCTGGAGGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310335 True 530 lncRNA 0.49 2 66298 66999

Neighbor

gene id symbol gene type direction distance location
CI01000069_00059923_00065619 MAPK3, MAPK1, MK03 coding downstream 282 59853 ~ 66016 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC coding downstream 13402 43906 ~ 52896 (-)
CI01000069_00041648_00043198 EHD3 coding downstream 22857 41648 ~ 43441 (-)
CI01000069_00029366_00037113 NA coding downstream 28732 29357 ~ 37566 (-)
CI01000069_00000091_00001650 HSPA6, HSP70B, HSPA1B, HSP70A, ADA, HSP70.1, HSP70.3, HSP70.2, HSP70L coding downstream 64025 91 ~ 2273 (-)
CI01000069_00070778_00073734 BRAFLDRAFT_264576, BRAFLDRAFT_218264, BRAFLDRAFT_218328, PPP4CB, PPP4C, PPP4CA coding upstream 3497 70496 ~ 74403 (-)
CI01000069_00142555_00146746 NA coding upstream 75324 142323 ~ 147185 (-)
CI01000069_00156359_00158953 NA coding upstream 88733 155658 ~ 160090 (-)
CI01000069_00197131_00227540 XYLT1 coding upstream 130090 197089 ~ 227924 (-)
CI01000069_00254198_00256321 NA coding upstream 187011 254010 ~ 257542 (-)
G273493 NA non-coding downstream 17795 48300 ~ 48503 (-)
G273482 NA non-coding upstream 32721 99720 ~ 120649 (-)
G273483 NA non-coding upstream 84537 151536 ~ 154085 (-)
G273528 NA non-coding upstream 201156 268155 ~ 268357 (-)
G273530 NA non-coding upstream 204726 271725 ~ 271933 (-)
CI01000069_00952894_00955774 NA other upstream 746236 952361 ~ 955790 (-)
G275178 NA other upstream 859924 926923 ~ 945804 (-)
CI01000069_01645966_01647142 NA other upstream 1578769 1644522 ~ 1647326 (-)
CI01000069_02589498_02621318 SYT3 other upstream 2544176 2589469 ~ 2621641 (-)
CI01000069_02997434_03008924 NA other upstream 2922027 2997275 ~ 3008924 (-)

Expression


Co-expression Network