G273282


Basic Information

Item Value
gene id G273282
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 173711 ~ 174053 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU310115
AAGTAAAGCTTTGCTGATCTTGTAGCCTTCACCATTCTGGTGTAAAGAAATTATTTTCTTTCTCAGGTCTTGTGACATTTCTCTTCCATGTGGTGCCATTGCTGACAGCATGAAATGGGAAGGGGTTTTAACACCCTTTTATAGTCAACTGTCTGCTGGACACCTGTGTAATGAATAATTAGACTTACCTGTGGTTGAATTCTTGTTAAATTAGACATTTGTAGTCTAAAATTTAGCTTTGCTCCAGAGACTTTCAGTGGGGTGTACTCATTTTTGCATCACCCTAATCTGAGTAAAACTGAAAAATGTGTAATCTAAGTTATATTATTAACCTCACTTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310115 True 343 lncRNA 0.36 1 173711 174053

Neighbor

gene id symbol gene type direction distance location
CI01000069_00147622_00154047 NA coding upstream 19643 147507 ~ 154068 (+)
CI01000069_00091982_00141515 RHOT1, RHOT1A coding upstream 31395 91674 ~ 142316 (+)
CI01000069_00075784_00090901 ATAD5 coding upstream 82615 75394 ~ 91096 (+)
CI01000069_00066477_00068981 NUDT9 coding upstream 104362 66060 ~ 69349 (+)
CI01000069_00016660_00026781 ATP2A1L, ATP2A1 coding upstream 146877 16315 ~ 26834 (+)
CI01000069_00246608_00247385 NA coding downstream 72458 246511 ~ 248179 (+)
CI01000069_00357901_00365747 NA coding downstream 183848 357901 ~ 366519 (+)
CI01000069_00403871_00404476 SOCS1A coding downstream 229553 403606 ~ 404493 (+)
CI01000069_00575065_00578555 EMP2 coding downstream 401012 575065 ~ 578643 (+)
CI01000069_00596413_00741443 GRIN2A coding downstream 422360 596413 ~ 741443 (+)
G273281 NA non-coding upstream 182 173312 ~ 173529 (+)
G273278 NA non-coding upstream 2391 170902 ~ 171320 (+)
G273265 NA non-coding upstream 44397 129094 ~ 129314 (+)
G273257 NA non-coding upstream 118754 54579 ~ 54957 (+)
G273256 NA non-coding upstream 119165 54343 ~ 54546 (+)
G273284 NA non-coding downstream 1945 175998 ~ 266154 (+)
G273333 NA non-coding downstream 118132 292185 ~ 292397 (+)
G273338 NA non-coding downstream 157985 332038 ~ 332312 (+)
G273400 NA non-coding downstream 284744 458797 ~ 460096 (+)
G273401 NA non-coding downstream 308761 482814 ~ 483227 (+)
G273359 NA other downstream 303674 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 1859347 2031954 ~ 2040427 (+)
G274270 NA other downstream 2498571 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 2718793 2893418 ~ 2894947 (+)

Expression


Co-expression Network